Gene SNSL254_A1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1269 
Symbol 
ID6484275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1258832 
End bp1259125 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content52% 
IMG OID642736669 
Productanti-sigma28 factor FlgM 
Protein accessionYP_002040426 
Protein GI194444668 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0199272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTG ACCGTACCTC ACCTTTGAAA CCCGTTAGCA CTGTCCAGAC GCGCGAAACC 
AGCGACACGC CGGTACAAAA AACGCGTCAG GAAAAAACGT CCGCCGCGAC GAGCGCCAGC
GTAACGTTAA GCGACGCGCA AGCGAAGCTC ATGCAGCCAG GCGTCAGCGA CATTAATATG
GAACGCGTCG AAGCATTAAA AACGGCTATC CGTAACGGTG AGTTAAAAAT GGATACGGGA
AAAATAGCAG ACTCGCTCAT TCGCGAGGCG CAGAGCTACT TACAGAGTAA ATAA
 
Protein sequence
MSIDRTSPLK PVSTVQTRET SDTPVQKTRQ EKTSAATSAS VTLSDAQAKL MQPGVSDINM 
ERVEALKTAI RNGELKMDTG KIADSLIREA QSYLQSK