Gene SNSL254_A1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1251 
Symbol 
ID6486236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1244402 
End bp1245322 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content54% 
IMG OID642736651 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_002040408 
Protein GI194445518 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGT TGCCTAAGTT CTCCGTGGCC TTACTGCACC CGCGCTATTG GTTAACCTGG 
TTGGGTATAG GCGCGCTTTG GTTGGTCGTG CAACTCCCCT ACCCGGTCAT CTATAAATTG
GGTTGCGCAT TGGGCCACCT GGCGCGACGC GTAATGAAAC GCCGCGCGAA AATCGCCTAT
CGCAACCTTG AATTATGCTT TCCGGAAATG AGCGCGCAGG AACGCCACAC CATGGTGGTC
AAAAACTTTG AATCCGTCGG TATGGGCGTG ATGGAAACCG GCATGGCCTG GTTCTGGCCC
GATCGGCGAG TGAATCGCTG GATGGAAGCG AGCGGTCTGG AGCATATCCG TGAAGTTAAG
GCGCAGGGGC TGGGGTTCAT TCTGGTAGGA ATACATTTTC TTACCCTTGA GTTTGGCGCC
CGCATGTTTG GTATGCATAA CCCGGGTATC GGAGTTTATC GCCCGAATGA TAATCCGTTG
CTCGACTGGT TACAGACCTG GGGACGCTTA CGCTCCAATA AATCAATGTT GGATCGCAAA
GATCTGAAAG GCATGGTTAA GGCATTGAAA AGCGGCGAAT TGATCTGGTA TGCGCCGGAT
CACGATTACG GCCCGCGAGC CAGCGTCTTT GTACCGTTAT TCGCCGTCGA CCAGGCCGCT
ACGACCTCCG GTACCTGGAT GCTCGCGCGC ATGTCTAAAG CCTGTATTAT CCCCTTCGTG
CCTCGCCGTA AACCCGATGG GAAAGGCTAC GAACTGATCA TTCTTCCTGC GGAATATTCG
CCTCCGCTGG AGAGCGCAGA AGCGACTGCC GCATGGATGA ATAAGATTGT TGAGCAGTGC
ATTATGATGG CGCCAGAGCA GTATATGTGG CTGCATCGCC GCTTTAAAAC TCGCCCTGAA
GGCGTACCGT CGCGCTATTG A
 
Protein sequence
MTKLPKFSVA LLHPRYWLTW LGIGALWLVV QLPYPVIYKL GCALGHLARR VMKRRAKIAY 
RNLELCFPEM SAQERHTMVV KNFESVGMGV METGMAWFWP DRRVNRWMEA SGLEHIREVK
AQGLGFILVG IHFLTLEFGA RMFGMHNPGI GVYRPNDNPL LDWLQTWGRL RSNKSMLDRK
DLKGMVKALK SGELIWYAPD HDYGPRASVF VPLFAVDQAA TTSGTWMLAR MSKACIIPFV
PRRKPDGKGY ELIILPAEYS PPLESAEATA AWMNKIVEQC IMMAPEQYMW LHRRFKTRPE
GVPSRY