| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1230 |
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| Symbol | |
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| ID | 6482662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1226852 |
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| End bp | 1227790 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642736631 |
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| Product | putative 2-hydroxyacid dehydrogenase YcdW |
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| Protein accession | YP_002040388 |
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| Protein GI | 194442483 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATAA TTTTTTATCA CCCGACATTT AACGCCGCCT GGTGGGTAAA TGCGCTGGAG
AAGGCTCTCC CACATGCGCG CGTTCGTGAA TGGAAGGTCG GTGATAACAA CCCCGCAGAC
TATGCGCTTG TATGGCAGCC CCCGGTTGAA ATGCTGGCCG GAAGACGCTT AAAAGCCGTC
TTTGCGCTGG GCGCGGGGGT GGATGCAATT CTGAGTAAAT TAAATGCGCA TCCGGAAATG
CTGGACGCCT CCATTCCTCT ATTCCGTCTG GAAGATACCG GAATGGGCCT GCAAATGCAG
GAGTATGCCG TCAGCCAGGT ATTACACTGG TTCCGTCGTT TCGATGATTA TCAGGCGCTG
AAAAATCAGG CGCTATGGAA ACCGTTGCCG GAATATACCC GCGAAGAGTT TAGCGTCGGT
ATCATGGGCG CAGGGGTACT GGGCGCAAAA GTGGCAGAAA GTCTACAGGC GTGGGGGTTC
CCGTTACGTT GCTGGAGTCG TAGCCGCAAA TCCTGGCCTG GCGTGGAAAG TTATGTTGGG
CGTGAAGAGC TGCACGCTTT CCTGAACCAG ACGCGGGTGC TGATTAATCT GCTGCCGAAT
ACGGCCCAAA CGGTAGGAAT TATTAATAGC GAATTGTTGG ATCAATTGCC GGATGGCGCT
TACGTGTTGA ATCTCGCGCG CGGCGTGCAT GTTCAGGAGG CGGATCTGCT GGCTGCGCTT
GATAGCGGTA AGCTAAAAGG CGCGATGTTG GATGTCTTTA GCCAGGAACC GTTACCGCAG
GAAAGTCCAT TATGGCGCCA TCCGCGAGTC GCCATGACGC CGCACATTGC GGCAGTCACC
CGTCCAGCGG AAGCCATCGA TTATATTAGC CGCACCATTA CCCAGCTGGA GAAGGGAGAG
CCGGTGACGG GGCAGGTGGA TCGGGCGAGA GGATATTGA
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| Protein sequence | MEIIFYHPTF NAAWWVNALE KALPHARVRE WKVGDNNPAD YALVWQPPVE MLAGRRLKAV
FALGAGVDAI LSKLNAHPEM LDASIPLFRL EDTGMGLQMQ EYAVSQVLHW FRRFDDYQAL
KNQALWKPLP EYTREEFSVG IMGAGVLGAK VAESLQAWGF PLRCWSRSRK SWPGVESYVG
REELHAFLNQ TRVLINLLPN TAQTVGIINS ELLDQLPDGA YVLNLARGVH VQEADLLAAL
DSGKLKGAML DVFSQEPLPQ ESPLWRHPRV AMTPHIAAVT RPAEAIDYIS RTITQLEKGE
PVTGQVDRAR GY
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