| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1228 |
|---|
| Symbol | |
|---|
| ID | 6484132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 1225275 |
|---|
| End bp | 1226378 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642736628 |
|---|
| Product | putative oxidoreductase YjhC |
|---|
| Protein accession | YP_002040386 |
|---|
| Protein GI | 194443420 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAT ACGGTGTTGT AGGTACAGGT TATTTTGGCG CTGAACTGGC GCGATTTATG
TCTAAGGTTG AAGGGGCGAA AATCACTGCG ATTTACGATC CGGTAAATGC GGCTCCGATA
GCGAAAGAGT TGAACTGTGT CGCCACTGCA ACGATGGAGG CGCTTTGTTC CCATCCTGAT
GTGGATTGCG TAATTATTGC TTCACCAAAT TACTTACATA AAGCGCCAGT CATTGCGGCG
GCTAAAGCGG GTAAACACGT GTTTTGTGAA AAACCTATCG CCTTAAATTA CCAGGATTGT
AAGGATATGG TTGATGCCTG CAAAGAAGCT GGTGTTACCT TTATGGCGGG TCACGTTATG
AACTTTTTTC ATGGGGTTCG CCACGCTAAA GCGCTCATCA AAGCTGGTGA AATTGGTGAA
GTTACACAAG TTCACACTAA ACGTAATGGT TTTGAAGACG TGCAGGATGA GATCTCATGG
AAGAAGATTC GCGCAAAGTC AGGTGGGCAT CTGTACCATC ACATTCACGA GCTAGATTGT
ACACTGTTCA TCATGGATGA AACCCCATCC CTGGTTTCAA TGGCGGCGGG GAATGTTGCG
CACAAAGGTG AAAAATTTGG TGATGAAGAT GATGTTGTCC TAATCACCCT TGAGTTTGAA
AGCGGTCGTT TCGCGACACT TCAGTGGGGA TCATCGTTCC ACTACCCTGA GCACTATGTA
TTAATTGAGG GCACGACAGG TGCAATTCTC ATTGATATGC AAAACACGGC TGGTTATCTA
ATAAAAGCGG GCAAAAAAAC ACACTTTCTT GTGCATGAAA GCCAGGCGGA GGATGATGAT
CGTCGCAACG GTAACATATC CAGCGAGATG GATGGCGCAA TCGCTTATGG TAAACCCGGT
AAACGTACGC CGATGTGGCT CTCATCAATT ATGAAACTGG AGATGCAGTA CTTGCATGAT
GTGATAAACG GTCTGGAGCC AGGCGAGGAG TTTGCTAAAT TGCTAACGGG AGAAGCGGCG
ACAAATGCCA TTGCTACCGC TGATGCTGCG ACGCTTTCCT CAAACGAGGG GCGCAAAGTA
AAACTCACTG AAATTCTTGG CTAA
|
|---|
| Protein sequence | MTKYGVVGTG YFGAELARFM SKVEGAKITA IYDPVNAAPI AKELNCVATA TMEALCSHPD
VDCVIIASPN YLHKAPVIAA AKAGKHVFCE KPIALNYQDC KDMVDACKEA GVTFMAGHVM
NFFHGVRHAK ALIKAGEIGE VTQVHTKRNG FEDVQDEISW KKIRAKSGGH LYHHIHELDC
TLFIMDETPS LVSMAAGNVA HKGEKFGDED DVVLITLEFE SGRFATLQWG SSFHYPEHYV
LIEGTTGAIL IDMQNTAGYL IKAGKKTHFL VHESQAEDDD RRNGNISSEM DGAIAYGKPG
KRTPMWLSSI MKLEMQYLHD VINGLEPGEE FAKLLTGEAA TNAIATADAA TLSSNEGRKV
KLTEILG
|
|---|
| |