| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1196 |
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| Symbol | |
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| ID | 6483960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1190557 |
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| End bp | 1191846 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642736598 |
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| Product | 4-hydroxyphenylacetate degradation bifunctionalisomerase/decarboxylase |
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| Protein accession | YP_002040356 |
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| Protein GI | 194443584 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR02303] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit
[TIGR02305] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.659374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGTA CTGTTTTCGC CGTTGCGTTA AACCATCGCA GCCAGCTTGA TGCCTGGCGA
GAGGCTTTCT CTCAGCCTCC CTATAATGCG CCGCCTAAAA CCGCAGTGTG GTTCATCAAG
CCGCGTAATA CGGTGATTCG TCACGGCGAA CCCATTCCTT ATCCGCAGGG AGAAAAGGTA
CTGAGCGGCG CGACAGTGGC GCTCATTGTG GGGAAAACCG CCAGCCGGAT ACGCCCTGAA
GCGGCGGCGG ACTATATCGC CGGGTATGCG CTGGCTAACG AGGTCAGCCT GCCGGAAGAG
AGCTTTTATC GCCCGGCGAT TAAAGCGAAA TGTCGCGATG GCTTTTGCCC GCTGGGTGAA
ATGGCGCCGC TGAGTGATGT GGATAACCTC ACCATTATCA CTGAAATCAA CGGACGAGAA
GCGGACCACT GGAATACTGC TGATTTACAG CGTAGCGCCG CACAACTGCT TAGCGCGTTA
AGTGAGTTCG CTACGCTTAA CCCTGGCGAT GCGATCTTAC TCGGTACGCC GCAGAATCGC
GTTGCGCTGC GTCCCGGCGA TCGGGTGCGT ATTCTGGCGA AAGGTTTACC CGCTCTGGAA
AATCCGGTTG TCGCAGAAGA TGAATTCGCC CGCCACCAGA CGTTTACGTG GCCGCTGTCA
GCGACGGGAA CGTTATTTGC GCTGGGGTTG AACTACGCCG ATCACGCCAG CGAGCTGGCA
TTTACGCCGC CGAAAGAGCC GCTGGTATTT ATCAAAGCGC CAAACACCTT TACCGAACAT
CACCAAACGT CGGTGCGCCC GAACAACGTC GAATATATGC ACTACGAAGC CGAGCTGGTC
GTGGTGATTG GCAAAACGGC GCGTAAGGTG AGCGAAGCCG AAGCTATGGA GTATGTGGCC
GGTTACACCG TCTGCAACGA CTACGCGATC CGCGACTATC TGGAAAACTA CTACCGTCCG
AATCTGCGGG TAAAAAGCCG CGACGGCCTG ACGCCGATAG GCCCGTGGAT TGTGGATAAA
GAGGCGGTTT CTGATCCGCA TAACCTGACG TTACGCACCT TTGTCAACGG TGAGCTGCGC
CAGGAAGGGA CGACCGCCGA TCTGATCTTC AGCATCCCGT TCCTGATTTC TTATCTGAGC
GAATTTATGA CGTTGCAACC GGGCGACATG ATTGCCACCG GTACGCCGAA AGGGTTGTCC
GATGTGGTGC CGGGGGATGA AGTTGTCGTG GAAGTAGAAG GCGTGGGTCG CCTGGTTAAC
CGAATCGTCA GTGAGGAGAG TGCAAAATGA
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| Protein sequence | MKGTVFAVAL NHRSQLDAWR EAFSQPPYNA PPKTAVWFIK PRNTVIRHGE PIPYPQGEKV
LSGATVALIV GKTASRIRPE AAADYIAGYA LANEVSLPEE SFYRPAIKAK CRDGFCPLGE
MAPLSDVDNL TIITEINGRE ADHWNTADLQ RSAAQLLSAL SEFATLNPGD AILLGTPQNR
VALRPGDRVR ILAKGLPALE NPVVAEDEFA RHQTFTWPLS ATGTLFALGL NYADHASELA
FTPPKEPLVF IKAPNTFTEH HQTSVRPNNV EYMHYEAELV VVIGKTARKV SEAEAMEYVA
GYTVCNDYAI RDYLENYYRP NLRVKSRDGL TPIGPWIVDK EAVSDPHNLT LRTFVNGELR
QEGTTADLIF SIPFLISYLS EFMTLQPGDM IATGTPKGLS DVVPGDEVVV EVEGVGRLVN
RIVSEESAK
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