| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1185 |
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| Symbol | |
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| ID | 6484347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1178786 |
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| End bp | 1179661 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642736587 |
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| Product | secreted effector protein |
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| Protein accession | YP_002040345 |
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| Protein GI | 194442885 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATAA CTAACGCGTC CCCAGAAAAT ATATTAAGAT ATTTGCATGC GGCCGGTACC
GGTACGAAAG AAGCAATGAA AAGTGCAACT TCACCACGCG GTATACTGGA ATGGTTTGTC
AATTTTTTTA CCTGTGGTGG AGTAAGAAGA AGCAATGAAA GATGCTTTCG GGAGGTAATT
GGAAAACTGA CCACATCATT ATTATATGTA AATAAAAATG CTTTCTTCGA TGGTAATAAA
ATATTTCTGG AGGATGTCAA CGGGTGTACT ATATGTCTGT CATGTGGAGC AGCATCCGAA
AATACGGATC CCATGGTCAT TATTGAAGTG AACAAAAATG GAAAAACTGT AACGGATAAA
GTTGATAGTG AGAGATTTTG GAATGTATGT CGAATGTTAA AACTGATGAG TAAACATAAT
ATACAACAGC CTGATTCACT TATAACCGAG GATGGTTTTC TGAACCTGCG CGGAGTAAAC
CTGGCTCATA AAGATTTCCA GGGGGAAGAT TTGTCAAAAA TAGATGCTTC TAATGCAGAT
TTCCGTGAAA CAACTCTTTC TAATGTAAAT TTAGTCGGTG CAAATTTGTG TTGTGCAAAT
CTACACGCTG TAAATCTAAT GGGTTCAAAC ATGACTAAAG CAAACCTGAC TCACGCAGAC
CTGACTTGCG CTAACATGTC CGGTGTAAAC TTAACCGCTG CAATTCTATT CGGCTCAGAC
TTAACTGACA CCAAACTAAA TGGTGCGAAA TTAGATAAGA TAGCTCTAAC TTTAGCGAAA
GCATTAACAG GAGCCGATCT GACAGGTAGT CAACATACCC CTACTCCACT CCCGGATTAC
AATGATAGAA CTCTTTTCCC CCATCCGATA TTTTAG
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| Protein sequence | MPITNASPEN ILRYLHAAGT GTKEAMKSAT SPRGILEWFV NFFTCGGVRR SNERCFREVI
GKLTTSLLYV NKNAFFDGNK IFLEDVNGCT ICLSCGAASE NTDPMVIIEV NKNGKTVTDK
VDSERFWNVC RMLKLMSKHN IQQPDSLITE DGFLNLRGVN LAHKDFQGED LSKIDASNAD
FRETTLSNVN LVGANLCCAN LHAVNLMGSN MTKANLTHAD LTCANMSGVN LTAAILFGSD
LTDTKLNGAK LDKIALTLAK ALTGADLTGS QHTPTPLPDY NDRTLFPHPI F
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