Gene SNSL254_A1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1178 
Symbol 
ID6485150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1171987 
End bp1173519 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content51% 
IMG OID642736580 
Productside tail fiber protein 
Protein accessionYP_002040338 
Protein GI194444577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.205878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.102671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA ATGATTTTAA ACCGTTTGCG ACGGGCAAGG GTGCTAATGT TACATCGCAG 
CCTGACTGGG AGGCGCTGCC GGCTCTCCTG TCTGGTTTTA CTGCGGGCAA GGCATCAAGT
GCACAGGTAA ATAAAGCGCT GCGTCAGGCG AGCTTCATCG CTGCAGCGCT GGCACAGTAC
ACAGCCAGCA AGAGCGGGCA GGATGTACTC GATGATGGTG ACCTGAGCGG CTTTATCGCC
AAAATGTCCG CTGCGTTCGG TAAGGATTTT CAGACTCTTG ATGCCACGCT GACGGCGCTC
GCTGGTCTGG CTACCGGTGC AGATAAACTC CCGTATTTCA CGGGAAATGA TACCGCCGGA
CAGACTGATC TTACTTCTGT TGGGCGCGAC ATCATCGGAA AAACCAGCGT TGCGGATATT
CTCACATACC TCGGTTTAGG AGAAACGATA AATCTGGCAA AAAATGCCGT TCCGGCGACG
CGCAGGGTTA ACAACAAACC GCTGTCCGGT GATATCAACC TGTGGGCGTC AGATGTGAAG
GCTATTTCCG CCGATGCTGT TGGAGAAATT ACCGATAACG GCACGATGGC ATCAGCTAAT
ATACCTGGAT GGTGGCGGGT GTCAGTGTCC AACTCTGACT CAGTCGCTGA TTTTCCCACC
TATCCGGATG GCAGCAAGCT GTACAGTTAT GGGTATATGT TTGTTGAGAA AATCGGGGAA
GTCTGGTTTC AGCACTATTA CGCGCATATG GGCGCGAACG CAAAGCGCCA AGACTGGGGA
ACTGAACCGA ATACCAGCCG TCCGTGGATT ATTGACTACA ATACCGCGAA CAAACCTTCA
GCCGGTGATG TGGGGGCATT GCCGATTACC GGGGGACGGC TTAACGGTTC GTTAGGTATT
GGTACTGATA ATGCGCTGGG CGGTAATTCT ATTGTGCTCG GTGATAACGA TACCGGGATT
AAGTGGCACA GTGACGGCGT TTTAGGCCTT TATGCCAATA ATGCCCTGGT CGGTTATATC
GACAACTCCG GGCTGCACAT GTCAGTTGAT GTTCTCACTA ATGGTATCTT ACGTGCCGGC
AACGGAAAAA CACTGACGTT ATCGAGTGGT AACAACTCCG CGATGAACGC CGGTTTCAGT
CTGTGGGGAA ATGGCACAGA CCGCCCAACG GTCATTGAAC TGAGTGACGA TCAGGGCTGG
CATTTCTACA GCCAGAGACG ACAAGACGGC GGTATCGAAC TGAGTGTAAA CGGCAATATT
TACCCTGCTA ATTACAGCAA TTTTGACGCC CGTTATTTAA CATCAGGAAA CGTATATACA
AAAGGCGAAT CAGATAATCG TTATGTCCAG AATATCCAGC GCGGTGCTCC TGTATGGCCT
GGCAAAGTAG ATGAATATGG ACCAGCAGAA GCGCCTGCTG GTTGCTTTTT AACACAGGCC
AGACATGACC CAACAACAGC ATACGGTGTG ACATTTGCGT ATAGACCGCT ACAAATGTGG
GTGGGTAATG GCTGGCGTAC AATTAATGGA TAA
 
Protein sequence
MAKNDFKPFA TGKGANVTSQ PDWEALPALL SGFTAGKASS AQVNKALRQA SFIAAALAQY 
TASKSGQDVL DDGDLSGFIA KMSAAFGKDF QTLDATLTAL AGLATGADKL PYFTGNDTAG
QTDLTSVGRD IIGKTSVADI LTYLGLGETI NLAKNAVPAT RRVNNKPLSG DINLWASDVK
AISADAVGEI TDNGTMASAN IPGWWRVSVS NSDSVADFPT YPDGSKLYSY GYMFVEKIGE
VWFQHYYAHM GANAKRQDWG TEPNTSRPWI IDYNTANKPS AGDVGALPIT GGRLNGSLGI
GTDNALGGNS IVLGDNDTGI KWHSDGVLGL YANNALVGYI DNSGLHMSVD VLTNGILRAG
NGKTLTLSSG NNSAMNAGFS LWGNGTDRPT VIELSDDQGW HFYSQRRQDG GIELSVNGNI
YPANYSNFDA RYLTSGNVYT KGESDNRYVQ NIQRGAPVWP GKVDEYGPAE APAGCFLTQA
RHDPTTAYGV TFAYRPLQMW VGNGWRTING