Gene SNSL254_A1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1171 
Symbol 
ID6485182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1166951 
End bp1168018 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content55% 
IMG OID642736573 
Productputative bacteriophage protein 
Protein accessionYP_002040331 
Protein GI194442325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.0038479 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACAGA ACTGGATGAG GCATTTCGAG CTGCAGCTCG TGGGCGAAAA CGGACAGGGT 
ATTCAACTCA GCGATTTTAA AGTGACCTTT ACGATCGACT GGTTCAACAT CAGCAGCGCG 
TCCCGGGTGG GAACGTTCAA AATCTACAAC CTGTCAGCTG ATACGGTGAA CCGCATCACC 
GGCCAGGAGT TTTCGAAAGT GCGGCTGATT GCCGGTTACG ACGGTATCGC GCCGGAGGTG 
GCAGCCAGCG ATGTCGGCAT TGCGCGGGAA GTCGACGCCG ACACGGTGGG CCAGAGCGAC 
GGGCGCAACT ACGGACTGAT TTTTAGTGGG GAAATTCGCT ACTCGGTCAC AGGAAAAGAC 
AGTCCCATTG ACTCCTACGT CCTGATTCAG GCCGCCGATA CGGATCTGGC ATTTGCCACC 
AGCATTACCA ATCAGACGCT GGCAGCGGGT TACACGACAG AAGATATGTT CAGGCTGTTG 
ATGAAAGACT TCGAAGCCAA AGGCGCGACC GTTGGTCGCA CTCCGGTATT CCCCCCGACT 
GTTTTCCCGC GCGGACGTGC GCTGTTTGGC ATGACACGGC ATCTTATGGA TAACGTTGCT 
GCTCAGTGCG GCGCCACCTG GCAGTTCGTG GATGGTCAGC TTAATATGCT GCCCGAAGGT 
GAATACATGC ACGACGCGAT TGTGCTCAAC AGCGCCACCG GGCTGATCGG CATGCCTCAG 
CAGACCATCG GTAATGGCGT TAACGTCCGC GCGCTGATTA ACCCGAACAT CCGGGTTAAC 
GGGCTAATTC AACTGGATCA GGCTTCGGTG TATCGTACTG CATTGTCGAA CAACGATATT 
GCTATGACTG GTGGCCGTAT CACCGACCAG AACACTGACG GCAATATCAC ACTCAGCGGC 
ACCACGGCGC AGCCTGCCAG CATCGCAACG GATGGCGTTT ATGTTGTGAA AGGCATTATG 
TATACTGGTG ATACAAGGGG CCAGGCGTGG TACATGGACA TGATGTGCGA AGCGCGTGGC 
GCGGCGGATC TTGTTTCCTC ATCAGCGAGG GAAAGAGGGC TTCAATGA
 
Protein sequence
MSQNWMRHFE LQLVGENGQG IQLSDFKVTF TIDWFNISSA SRVGTFKIYN LSADTVNRIT 
GQEFSKVRLI AGYDGIAPEV AASDVGIARE VDADTVGQSD GRNYGLIFSG EIRYSVTGKD 
SPIDSYVLIQ AADTDLAFAT SITNQTLAAG YTTEDMFRLL MKDFEAKGAT VGRTPVFPPT 
VFPRGRALFG MTRHLMDNVA AQCGATWQFV DGQLNMLPEG EYMHDAIVLN SATGLIGMPQ 
QTIGNGVNVR ALINPNIRVN GLIQLDQASV YRTALSNNDI AMTGGRITDQ NTDGNITLSG 
TTAQPASIAT DGVYVVKGIM YTGDTRGQAW YMDMMCEARG AADLVSSSAR ERGLQ