Gene SNSL254_A1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1155 
Symbol 
ID6485908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1154796 
End bp1156232 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content56% 
IMG OID642736557 
Productphage-associated protein family 
Protein accessionYP_002040315 
Protein GI194443077 
COG category[S] Function unknown 
COG ID[COG3567] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01555] phage-related protein, HI1409 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.944585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.000000000818534 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAGGCCA CGGCCGACGG CTACGAGAAC TTTGTCGCCC GCGTGGGGAT GCAGACGCCT 
AACCAGCACT CCGCATCGAC CTACCGGGCG AACTTCACCA GCCGCAACCG TATGCTGGTG
GAATGGTCCT ATCGCTCGTC CTGGCTCATC GGTGAAGCGG TAGATGCTAT CCCCGACGAC
ATGACCCGCA AAGGCATTCG CATCACTTCT GAGATTGACG CAAAAGACCG TGGCACTCTC
GAAGCGCAGC TGGACCAGTT GCAAATCTGG GATGCGCTGA ACGACGTACT GAAATGGTCT
CGTCTCTACG GCGGCGCGGT GGGCTTCATC ATGATAGAAG GTCAGGCGCC CATGGCCCCG
CTACGGCTCG AAACCATTGG TGAAGGCAAG TTTAAGGGGA TTCTCCCGCT CGACCGCTGG
ATGATTAACC CGGTACTGAC CCGCCGCATT AAAGAAATGG GGCCGAATCT CGGCAAGCCT
GAGCTTTATG ATGTGGTGAC CACAGCAACG GGTATCCCCG CCTGGCGTAT TCACCACAGT
CGCCTGATTC GCTTCGATGG GGTGACGCTG CCATTCCAGC AGAAGATGAC CGAGAACGAA
TGGGGAATGT CGGTTGTAGA GCGTATCTGG GATCGGCTCA CTGCGTTCGA CAGCGCCACT
GTCGGTGCGG CGCAGTTGGT CTACAAAGCG CATCTGCGGA CCTACAAAGT GGAAAAACTC
CGTGAGCTTA TTGCACTGGG CGGCCCGGCA TTCGAGGCGT TGCTGAAAAA CATTGATCTG
ATCCGCCAGT TTCAGAGCAA TGAAGGCATG ACGCTAATGG ATGCCAAGGA TACCTTCGAA
ACCCACCAGT ACAGTTTCAG CGGTCTGGAT GACATTCTTT CGCAGTTCGC CGAGCAGATT
AGCGGTGCTG TTGGCATTCC ACTGGTGCGC CTGTTCGGGC AGTCCCCTAA AGGTTTCTCA
ACGGGTGACG CAGACCTTGC CAACTATTAT GACCGGGTTA GTTCATTGCA GGAACGTCGC
TTACGCCTGC CAGTGCGCCG GGTGCTGGAC ATTATGCATC GTTCGGAGCT CGGTAAGCCG
CTGCCGGACG ATTTCACGTT TGAGTTTAAC CCGCTATGGC AGATGTCAGA TGTGGACCGC
TCAACGGTGG CTGTGAATAC CACAACGGCG ATTGTCAATG CGTTGGATGC AGGTCTGATG
ACAACCAAAG CCGCTATGAC CGACCTGCGT GAGAACTCCG ATGTTACTGG CATCGGGGCA
TCCATTACCG ACGAGGATAT CGAGAATGCC GAAGACGAAG CGCCACCAGA CATCGGCGAA
CTTGTCGACA AACCGCCAGA GCCGACAGGC GGAGATCCGA TATCGAACGA GCCTACGGCA
GATAGCGCGG GCGGTCGGGG ATATCGTAAA TGGGCACTAC GATGGTTCAA ACGATAG
 
Protein sequence
MQATADGYEN FVARVGMQTP NQHSASTYRA NFTSRNRMLV EWSYRSSWLI GEAVDAIPDD 
MTRKGIRITS EIDAKDRGTL EAQLDQLQIW DALNDVLKWS RLYGGAVGFI MIEGQAPMAP
LRLETIGEGK FKGILPLDRW MINPVLTRRI KEMGPNLGKP ELYDVVTTAT GIPAWRIHHS
RLIRFDGVTL PFQQKMTENE WGMSVVERIW DRLTAFDSAT VGAAQLVYKA HLRTYKVEKL
RELIALGGPA FEALLKNIDL IRQFQSNEGM TLMDAKDTFE THQYSFSGLD DILSQFAEQI
SGAVGIPLVR LFGQSPKGFS TGDADLANYY DRVSSLQERR LRLPVRRVLD IMHRSELGKP
LPDDFTFEFN PLWQMSDVDR STVAVNTTTA IVNALDAGLM TTKAAMTDLR ENSDVTGIGA
SITDEDIENA EDEAPPDIGE LVDKPPEPTG GDPISNEPTA DSAGGRGYRK WALRWFKR