Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1155 |
Symbol | |
ID | 6485908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1154796 |
End bp | 1156232 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642736557 |
Product | phage-associated protein family |
Protein accession | YP_002040315 |
Protein GI | 194443077 |
COG category | [S] Function unknown |
COG ID | [COG3567] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01555] phage-related protein, HI1409 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.944585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000000000818534 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCAGGCCA CGGCCGACGG CTACGAGAAC TTTGTCGCCC GCGTGGGGAT GCAGACGCCT AACCAGCACT CCGCATCGAC CTACCGGGCG AACTTCACCA GCCGCAACCG TATGCTGGTG GAATGGTCCT ATCGCTCGTC CTGGCTCATC GGTGAAGCGG TAGATGCTAT CCCCGACGAC ATGACCCGCA AAGGCATTCG CATCACTTCT GAGATTGACG CAAAAGACCG TGGCACTCTC GAAGCGCAGC TGGACCAGTT GCAAATCTGG GATGCGCTGA ACGACGTACT GAAATGGTCT CGTCTCTACG GCGGCGCGGT GGGCTTCATC ATGATAGAAG GTCAGGCGCC CATGGCCCCG CTACGGCTCG AAACCATTGG TGAAGGCAAG TTTAAGGGGA TTCTCCCGCT CGACCGCTGG ATGATTAACC CGGTACTGAC CCGCCGCATT AAAGAAATGG GGCCGAATCT CGGCAAGCCT GAGCTTTATG ATGTGGTGAC CACAGCAACG GGTATCCCCG CCTGGCGTAT TCACCACAGT CGCCTGATTC GCTTCGATGG GGTGACGCTG CCATTCCAGC AGAAGATGAC CGAGAACGAA TGGGGAATGT CGGTTGTAGA GCGTATCTGG GATCGGCTCA CTGCGTTCGA CAGCGCCACT GTCGGTGCGG CGCAGTTGGT CTACAAAGCG CATCTGCGGA CCTACAAAGT GGAAAAACTC CGTGAGCTTA TTGCACTGGG CGGCCCGGCA TTCGAGGCGT TGCTGAAAAA CATTGATCTG ATCCGCCAGT TTCAGAGCAA TGAAGGCATG ACGCTAATGG ATGCCAAGGA TACCTTCGAA ACCCACCAGT ACAGTTTCAG CGGTCTGGAT GACATTCTTT CGCAGTTCGC CGAGCAGATT AGCGGTGCTG TTGGCATTCC ACTGGTGCGC CTGTTCGGGC AGTCCCCTAA AGGTTTCTCA ACGGGTGACG CAGACCTTGC CAACTATTAT GACCGGGTTA GTTCATTGCA GGAACGTCGC TTACGCCTGC CAGTGCGCCG GGTGCTGGAC ATTATGCATC GTTCGGAGCT CGGTAAGCCG CTGCCGGACG ATTTCACGTT TGAGTTTAAC CCGCTATGGC AGATGTCAGA TGTGGACCGC TCAACGGTGG CTGTGAATAC CACAACGGCG ATTGTCAATG CGTTGGATGC AGGTCTGATG ACAACCAAAG CCGCTATGAC CGACCTGCGT GAGAACTCCG ATGTTACTGG CATCGGGGCA TCCATTACCG ACGAGGATAT CGAGAATGCC GAAGACGAAG CGCCACCAGA CATCGGCGAA CTTGTCGACA AACCGCCAGA GCCGACAGGC GGAGATCCGA TATCGAACGA GCCTACGGCA GATAGCGCGG GCGGTCGGGG ATATCGTAAA TGGGCACTAC GATGGTTCAA ACGATAG
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Protein sequence | MQATADGYEN FVARVGMQTP NQHSASTYRA NFTSRNRMLV EWSYRSSWLI GEAVDAIPDD MTRKGIRITS EIDAKDRGTL EAQLDQLQIW DALNDVLKWS RLYGGAVGFI MIEGQAPMAP LRLETIGEGK FKGILPLDRW MINPVLTRRI KEMGPNLGKP ELYDVVTTAT GIPAWRIHHS RLIRFDGVTL PFQQKMTENE WGMSVVERIW DRLTAFDSAT VGAAQLVYKA HLRTYKVEKL RELIALGGPA FEALLKNIDL IRQFQSNEGM TLMDAKDTFE THQYSFSGLD DILSQFAEQI SGAVGIPLVR LFGQSPKGFS TGDADLANYY DRVSSLQERR LRLPVRRVLD IMHRSELGKP LPDDFTFEFN PLWQMSDVDR STVAVNTTTA IVNALDAGLM TTKAAMTDLR ENSDVTGIGA SITDEDIENA EDEAPPDIGE LVDKPPEPTG GDPISNEPTA DSAGGRGYRK WALRWFKR
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