Gene SNSL254_A1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1150 
Symbol 
ID6485340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1150696 
End bp1151235 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content55% 
IMG OID642736552 
Productlysozyme 
Protein accessionYP_002040310 
Protein GI194444753 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.258572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000000000000138553 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCACA GGACAAAAGT TAAATACGGT CTTTCCGCCG CCATGCTGGC GCTGATTGCC 
GCCGGTGCCA GCGCACCGCA ACTACTCGAC CAGTTTTTGC AGGAGCGGGA AGGAAATACG
CTGGTGGCCG TTCGTGATAA CGGAGGCGTC TGGTCAGTAT GCCGTGGCGT GACTCATATC
GATGGTAAAC CCGTTGTGAA AGGCCAGCGA CTGACACAAA GCCAGTGCGA CCATTACAAC
GCCATCGAGC GGGATAAAGC GCTGGCATGG GTAAATAAAC ATGTTCACAT ACCGCTGACC
GAACCGCAGA AAGCCGGTAT TGCGTCGTTC TGTCCGTATA ACATCGGTCC CGGTAAATGT
TTCCCGTCCA CGTTTTACCG GAAGCTCAAC GCAGGAGATC GCAAAGGAGC GTGTGCAGAA
ATCCGCCGTT GGGTATATGA CGGCGGCAAA GACTGCCGCA ACAGGGAAAA TCAGTGTTAC
GGCCAGGTGA TACGACGCGA CCAGGAATCG GCGCTGGCGT GCTGGGGTAT TGATCAATAA
 
Protein sequence
MAHRTKVKYG LSAAMLALIA AGASAPQLLD QFLQEREGNT LVAVRDNGGV WSVCRGVTHI 
DGKPVVKGQR LTQSQCDHYN AIERDKALAW VNKHVHIPLT EPQKAGIASF CPYNIGPGKC
FPSTFYRKLN AGDRKGACAE IRRWVYDGGK DCRNRENQCY GQVIRRDQES ALACWGIDQ