Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1150 |
Symbol | |
ID | 6485340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1150696 |
End bp | 1151235 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642736552 |
Product | lysozyme |
Protein accession | YP_002040310 |
Protein GI | 194444753 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.258572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000000000000138553 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGCACA GGACAAAAGT TAAATACGGT CTTTCCGCCG CCATGCTGGC GCTGATTGCC GCCGGTGCCA GCGCACCGCA ACTACTCGAC CAGTTTTTGC AGGAGCGGGA AGGAAATACG CTGGTGGCCG TTCGTGATAA CGGAGGCGTC TGGTCAGTAT GCCGTGGCGT GACTCATATC GATGGTAAAC CCGTTGTGAA AGGCCAGCGA CTGACACAAA GCCAGTGCGA CCATTACAAC GCCATCGAGC GGGATAAAGC GCTGGCATGG GTAAATAAAC ATGTTCACAT ACCGCTGACC GAACCGCAGA AAGCCGGTAT TGCGTCGTTC TGTCCGTATA ACATCGGTCC CGGTAAATGT TTCCCGTCCA CGTTTTACCG GAAGCTCAAC GCAGGAGATC GCAAAGGAGC GTGTGCAGAA ATCCGCCGTT GGGTATATGA CGGCGGCAAA GACTGCCGCA ACAGGGAAAA TCAGTGTTAC GGCCAGGTGA TACGACGCGA CCAGGAATCG GCGCTGGCGT GCTGGGGTAT TGATCAATAA
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Protein sequence | MAHRTKVKYG LSAAMLALIA AGASAPQLLD QFLQEREGNT LVAVRDNGGV WSVCRGVTHI DGKPVVKGQR LTQSQCDHYN AIERDKALAW VNKHVHIPLT EPQKAGIASF CPYNIGPGKC FPSTFYRKLN AGDRKGACAE IRRWVYDGGK DCRNRENQCY GQVIRRDQES ALACWGIDQ
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