Gene SNSL254_A1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1133 
Symbol 
ID6482210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1138180 
End bp1140444 
Gene Length2265 bp 
Protein Length754 aa 
Translation table11 
GC content47% 
IMG OID642736535 
Producthypothetical protein 
Protein accessionYP_002040293 
Protein GI194445571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.299719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.5018600000000001e-24 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAATTT ACAACTGTCT GTTCGAGCCG AAGAAATCGG CTATTAAAGA TGGTGCTGTT 
GCGCTGGCAA TCAGCATCGA AGCACCAAAT AAAAAAGTCG CTGAAAGTAT CGTCATTGGC
AAACTCTGGG AACACTACCC GGCAAACGGC GACAACTATT TTAAGCCCAA AATCTGGGAA
GACTCGGAGG ATCAGCCTCG TCCGGAAGTT GGAAAATTTG ATGAACAATT TGCTCAGGCG
AACACTTTTG ACGGGGAAAA ATGGATCGCC AACAAACCAG ACACCAGCGT TCCAGGTTTA
CCAAGCAGTG ATGAAATCAT CGATCTGATG AAGCTGCCAG CCCGGGAACG GTTCGCTGCC
GTCCTCATGT TCAGCAATTC TCCCATAGAT GGCGTGCTTT ATTCTCAGGT TCTGGACTAT
CTCGATAATC TGGAAAATAA CACTGAACCC TTTGATGATG ACGATCGGAT TAATTCAAAT
ATCCTTCATG CACTGCACAA TAACGAGCCC GTTCGTCATA TGCATGTTGA AGGGTTAAAC
AATCTTATTC AGGCCATCTT AGCTAAATTT GAAGACCAGA CACCGGGCAA GGCTGCTATT
TCTCAATTTA TCAAACGCTG GCTGGAGAAT CCGGGTAAGC GTGAAGAAAT GGTACCAAGT
AAGACATCTT CCCTTAACAC CAGCGATAAT ATAGAGAGTC CTAAAGTGGC CCCCCTACGT
GGTTATAAAC ACACTTACGC AACACTGGAC CAGGAGATCG CCGTCGCCCT GCTGCCTATA
TCTCCTGACG CACCGGTGCT TTCAGGAAAT CTTCGCGATG CAGAAAAAAT CATTGCAGAA
GACCGGGAGG ATTTTAAACG CTGGTCAATG GCCCTGCGTA CCACTGAGAA GATCCTCAAA
TATGACCGAC CGAGTATTTT TGGCGTTATA CAGAACACGC CAGCTAAAGA TACTTACCAT
TTCCCAGAGT CTCTGCGGCG CCATATTGAT TCATGGCTGA CTGAGCATGG TCAGTTCGAA
TGTCCTGAAC CCGATGCGGA GAGGACTGGC AAATTGCTTG CGGCAGCGCG TGGCGAATAT
GTCGAAGGCA TCAGTGACCC TAACGATCCG AAATGGGTTA AAACCGATAC CCAACCACAG
GTATCAAACC TCGGCAATGG AATGTTCTCT GTTGATAATC TGATGTCTGA AGCCGCCTCA
AATGAATGTA AAAAACAGGA AGTAACCGAA CAAGGAACTG TTACAGATGA TCAGGCAACA
CAAGCCCGTG AAACGCTGAA TAGCATGGGT TATGGTGTTT ATGCAACGAA CCGGGACGAA
GCTATCCAGC AGGAAGAAAA GCTGAGCGAT AAAGTAAAAA ATATCGTTCA GGATGTGGAT
CAACTTGTCG AGCGCATTAA ACGTGAAGAG CAGTTCCCGC AGGCCTCTGA ACTGGTTCAG
AGCATCAACG AAATGCAGTC TGCTGAACGC GATAACCTGG AATTGTGGAA AAACGTGTTC
AAAACAGATG AGCGTTTTAC TACTGCGTTC TCTGTGAACG GAGGCGGAAC CTCAATCAAT
GGTACCTACA TGACCATGAT CGCTACACGC GAATTTGGTC CAAAAGGTAT CGGCTGGGGT
GTCGATATTC TGGAAGAGCG CTTTGACAAT GGCGCGCCAA TTACTCGCAC AGTCAAAGGC
ACTGACGGTA ACAACACGTG GGAACTTATC CCCGACGGTG TCCTGACAGA AAAACATCAC
GTTATCAAAA TCAGACTTTG GTACATCCGC AATAGTGTAC GCGGTGAGGA GATTTCTTTC
GGGTGTACCC CATATATTTA CGGCAGCAAA TATGGCCCTA TTTGTGATGG TGAAGCAACA
AAAAAATCAC TGACTGACGC AACCAAAAAA GCACTGTCTG CGCTTGGTTT CTGCGCTGAT
ATTTTCATGG GCCTGTACGA CAACCCGGAG TATCGACAGA AAAATAAAGC TGAATTCGCG
CTGAAAAATG CCAGTGAAAA CGCTGAGGAT GCAGCCCGCG TCCGCCAGGA ACTGGACGAC
AAACTAACCC GAGTCGCTAA CACCATTGCA TCTGCTGTAT CAGAAAACGA GATCAACAAA
GTCTATTCAT CGATTGCCCG CGAAGCGGAA GTGCATCGCA AGGATGCAGA AGCGAAAGGT
GATACACAGC ACGCGCGTTA CTTAGGTGGG CGTCTGCGGC GGCTGACAAC CATTAAAGAT
GAACGTATCG CCGAACTGAA CAAAGCACAG GAGAAAGCAG AATGA
 
Protein sequence
MTIYNCLFEP KKSAIKDGAV ALAISIEAPN KKVAESIVIG KLWEHYPANG DNYFKPKIWE 
DSEDQPRPEV GKFDEQFAQA NTFDGEKWIA NKPDTSVPGL PSSDEIIDLM KLPARERFAA
VLMFSNSPID GVLYSQVLDY LDNLENNTEP FDDDDRINSN ILHALHNNEP VRHMHVEGLN
NLIQAILAKF EDQTPGKAAI SQFIKRWLEN PGKREEMVPS KTSSLNTSDN IESPKVAPLR
GYKHTYATLD QEIAVALLPI SPDAPVLSGN LRDAEKIIAE DREDFKRWSM ALRTTEKILK
YDRPSIFGVI QNTPAKDTYH FPESLRRHID SWLTEHGQFE CPEPDAERTG KLLAAARGEY
VEGISDPNDP KWVKTDTQPQ VSNLGNGMFS VDNLMSEAAS NECKKQEVTE QGTVTDDQAT
QARETLNSMG YGVYATNRDE AIQQEEKLSD KVKNIVQDVD QLVERIKREE QFPQASELVQ
SINEMQSAER DNLELWKNVF KTDERFTTAF SVNGGGTSIN GTYMTMIATR EFGPKGIGWG
VDILEERFDN GAPITRTVKG TDGNNTWELI PDGVLTEKHH VIKIRLWYIR NSVRGEEISF
GCTPYIYGSK YGPICDGEAT KKSLTDATKK ALSALGFCAD IFMGLYDNPE YRQKNKAEFA
LKNASENAED AARVRQELDD KLTRVANTIA SAVSENEINK VYSSIAREAE VHRKDAEAKG
DTQHARYLGG RLRRLTTIKD ERIAELNKAQ EKAE