Gene SNSL254_A1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1118 
Symbol 
ID6482488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1129549 
End bp1130211 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content53% 
IMG OID642736521 
Producthypothetical protein 
Protein accessionYP_002040280 
Protein GI194444628 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00000000000226557 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACCG GCGCGCTAAC CACCTTCCTT GCTCTCTGTT TGCCGGTGAC TGTTTTTGCC 
ACAACGCTCC GTTTGTCTAA TGAGGTTGAT CTGCTGGTGC TGGACGGCAA AAAGGTGTCC
AGCTCTTTAT TACGCGGCGC AGAGAGCATT GAACTGGAAA ACGGGCCGCA TCAACTCGTT
TTCCGGGTGG AAAAAACCAT CCGCCTGCCC GGTAATGAAG AGCGGCTTTA TATTTCTCCG
CCGCTGGTGA TAAGTTTCGA TACCCAACTG ATAAGTCAGG TCAATTTCCA GCTCCCGCGG
CTGGAAAACG AGCGCGAAGC CTCGCATTTT AACGCGGCGC CGCGTCTGGC GCTTTTGGAC
GGCGACGCCA TGCCCATTCC GGTAAAACTC GATATTCTGG CCATTACTTC TACGGCTAAA
GTGGTCGATT ATGAAATAGA GACCGAGCGT TATAATAAAT CGGCGAAACG CGCCTCGCTT
CCTCAGTTCG CCACGATGAT GGCAGACGAC AGCACATTAC TTTCCGACGT CTCAGAGCTT
GATACCGTAC CGCCGCAATC ACAAACTCTG ACAGAACAGC GGCTGAAATA TTGGTTCCGA
CTGGCCGACC CGCAGACACG CCATCATTTT CTGCAATGGG CGGAAAAACA GCCGCCCTCT
TGA
 
Protein sequence
MKTGALTTFL ALCLPVTVFA TTLRLSNEVD LLVLDGKKVS SSLLRGAESI ELENGPHQLV 
FRVEKTIRLP GNEERLYISP PLVISFDTQL ISQVNFQLPR LENEREASHF NAAPRLALLD
GDAMPIPVKL DILAITSTAK VVDYEIETER YNKSAKRASL PQFATMMADD STLLSDVSEL
DTVPPQSQTL TEQRLKYWFR LADPQTRHHF LQWAEKQPPS