Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1118 |
Symbol | |
ID | 6482488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1129549 |
End bp | 1130211 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642736521 |
Product | hypothetical protein |
Protein accession | YP_002040280 |
Protein GI | 194444628 |
COG category | [S] Function unknown |
COG ID | [COG3110] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00000000000226557 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAACCG GCGCGCTAAC CACCTTCCTT GCTCTCTGTT TGCCGGTGAC TGTTTTTGCC ACAACGCTCC GTTTGTCTAA TGAGGTTGAT CTGCTGGTGC TGGACGGCAA AAAGGTGTCC AGCTCTTTAT TACGCGGCGC AGAGAGCATT GAACTGGAAA ACGGGCCGCA TCAACTCGTT TTCCGGGTGG AAAAAACCAT CCGCCTGCCC GGTAATGAAG AGCGGCTTTA TATTTCTCCG CCGCTGGTGA TAAGTTTCGA TACCCAACTG ATAAGTCAGG TCAATTTCCA GCTCCCGCGG CTGGAAAACG AGCGCGAAGC CTCGCATTTT AACGCGGCGC CGCGTCTGGC GCTTTTGGAC GGCGACGCCA TGCCCATTCC GGTAAAACTC GATATTCTGG CCATTACTTC TACGGCTAAA GTGGTCGATT ATGAAATAGA GACCGAGCGT TATAATAAAT CGGCGAAACG CGCCTCGCTT CCTCAGTTCG CCACGATGAT GGCAGACGAC AGCACATTAC TTTCCGACGT CTCAGAGCTT GATACCGTAC CGCCGCAATC ACAAACTCTG ACAGAACAGC GGCTGAAATA TTGGTTCCGA CTGGCCGACC CGCAGACACG CCATCATTTT CTGCAATGGG CGGAAAAACA GCCGCCCTCT TGA
|
Protein sequence | MKTGALTTFL ALCLPVTVFA TTLRLSNEVD LLVLDGKKVS SSLLRGAESI ELENGPHQLV FRVEKTIRLP GNEERLYISP PLVISFDTQL ISQVNFQLPR LENEREASHF NAAPRLALLD GDAMPIPVKL DILAITSTAK VVDYEIETER YNKSAKRASL PQFATMMADD STLLSDVSEL DTVPPQSQTL TEQRLKYWFR LADPQTRHHF LQWAEKQPPS
|
| |