| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1114 |
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| Symbol | yccS |
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| ID | 6483109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1124164 |
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| End bp | 1126317 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642736517 |
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| Product | hypothetical protein |
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| Protein accession | YP_002040276 |
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| Protein GI | 194446006 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.109888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00000043653 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAAGTC CGTTGATTCG CCGTTATACC TGGAACAGTA CCTGGCTGTA TTACATCCGC
ATTTTTATCG CTCTGTGCGG CACCACCGCC CTGCCCTGGT GGCTGGGCGA CGTCAAACTG
ACCATCCCGC TCACGCTCGG TATGGTTGCC GCGGCGCTAA CCGATCTCGA CGATCGCCTT
GCCGGACGCT TGCGTAATTT AATCATTACC TTAATTTGCT TTTTTATCGC GTCGGCTTCT
GTGGAGCTGC TCTTTCCCTG GCCGTGGCTA TTTGCGTTGG GCTTAACGTT ATCCACCAGC
GGGTTTATTC TGTTGGGAGG ACTGGGGCAA CGCTATGCCA CCATCGCGTT CGGCGCGTTA
CTCATTGCCA TCTATACGAT GCTGGGTACC TCTCTATACG ATCACTGGTA TCAGCAACCA
CTGCTCCTGC TGGCAGGCGC AGTATGGTAT AACCTACTGA CGCTAACCGG GCATCTGCTA
TTTCCGATCC GTCCGTTGCA GGATAATCTG GCACGCAGTT ACGAACAGTT AGCGCACTAT
CTGGAACTGA AATCACGTCT GTTTGATCCT GATATTGAAG ATGAAAGCCA GGCGCCGCTC
TATGATTTAG CGTTAGCGAA CGGGCAGTTA ATGGCGACGC TGAACCAAAC GAAAGTGTCG
TTATTGAGTC GCCTGCGCGG CGATCGCGGT CAACGCGGTA CGCGCCGCAC CCTCCATTAC
TATTTTGTGG CACAGGATAT TCATGAACGC GCCAGTTCTT CGCATATTCA ATACCAGACG
CTGCGCGATT ATTTTCGCCA TAGCGACGTC ATGTTCCGCT TTCAGCGTCT GATGTCGATG
CAGGCGCAGG CCTGTACGCA GCTGGCGCGC TGTATCTTAC TGCGTACGCC GTACCAGCAT
GATCCGCGTT TTGAACGCGT CTTTACCCAC ATTGACGCCG CGCTTGAACG TATGCGCGCC
AGCGGCGCTT CTTTAGAGCT GCTGAATACG CTTGGATTCT TATTAACCAA CCTACGCGCC
ATTGATGCGC AACTGGCGAC GATCGAGTCG GAGCAGGCCC AGGCAATGCC GCGCAATGAG
TCAGAAAACC AGTTGGCTGA TGATAGCCTA CACGGGTTTA GCGACATCTG GCTGCGTCTG
AGCCGTAATT TTACCCCGGA GTCCGCTCTC TTTCGCCATG CGGTACGCAT GTCGCTGGTA
TTGTGCATCG GTTATGCTCT CATCCAAATT ACCGGGATGC GCCACGGGTA CTGGATATTG
CTCACCAGCC TGTTTGTTTG CCAGCCTAAC TATAACGCGA CCCGCCATCG CCTTGCGCTC
AGGATTATCG GCACGTTGGT AGGCGTTGCT ATCGGCCTGC CGATTTTATG GTTTGTTCCT
TCGCTTGAAG GACAGTTAGT TCTGCTGGTG ATTACCGGCG TGCTTTTCTT CGCATTCCGT
AATGTGCAGT ATGCCCATGC AACGATGTTC ATCACCCTGC TGGTATTACT CTGCTTTAAC
CTCCTGGGCG AAGGCTTTGA GGTAGCGTTA CCGCGCGTCG TCGACACGTT AATTGGCTGC
GCTATCGCCT GGGCTGCGGT CAGCTTTATT TGGCCGGACT GGCGCTTTCG CAACCTTCCC
CGGGTACTCC AGCGCGCCAC CGATGCTAAT TGCCGCTACC TTGATGCGAT CCTTGAGCAA
TATCACCAGG GACGGGATAA CCGCCTGGCC TATCGCATTG CCAGACGCGA CGCGCACAAC
CGCGATGCAG AACTGGCATC CGTGGTTTCT AATATGTCGA GCGAACCCGA CGTCACGGCT
GAAACCCGGG AGGCGGCGTT CAGGCTGCTT TGCCTCAATC ACACTTTTAC CAGCTATATC
TCCGCCCTCG GCGCGCACCG CGAAAAGCTC AGTAATCCGG ACGTGTTGGG GCTTCTGGAT
GACGCGGTCT GCTACGTTGA TGATGCGCTT CATCATCAAC CTGAAGACGA ACAGCGCGTA
CACCAGGCGC TGGAGGGTTT AAAGCAGCGA GTTCAGTCAC TGGAAACACG TCCGGACAGC
AAAGAACCTC TGGTTGTTCA ACAAATTGGT TTGCTCATTG CCTTACTGCC CGAGATTGGA
CGCTTGCAAC GGCAAATTTC ACCGCCGACT TCTACATTAA TTACCCAGCC GTAA
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| Protein sequence | MLSPLIRRYT WNSTWLYYIR IFIALCGTTA LPWWLGDVKL TIPLTLGMVA AALTDLDDRL
AGRLRNLIIT LICFFIASAS VELLFPWPWL FALGLTLSTS GFILLGGLGQ RYATIAFGAL
LIAIYTMLGT SLYDHWYQQP LLLLAGAVWY NLLTLTGHLL FPIRPLQDNL ARSYEQLAHY
LELKSRLFDP DIEDESQAPL YDLALANGQL MATLNQTKVS LLSRLRGDRG QRGTRRTLHY
YFVAQDIHER ASSSHIQYQT LRDYFRHSDV MFRFQRLMSM QAQACTQLAR CILLRTPYQH
DPRFERVFTH IDAALERMRA SGASLELLNT LGFLLTNLRA IDAQLATIES EQAQAMPRNE
SENQLADDSL HGFSDIWLRL SRNFTPESAL FRHAVRMSLV LCIGYALIQI TGMRHGYWIL
LTSLFVCQPN YNATRHRLAL RIIGTLVGVA IGLPILWFVP SLEGQLVLLV ITGVLFFAFR
NVQYAHATMF ITLLVLLCFN LLGEGFEVAL PRVVDTLIGC AIAWAAVSFI WPDWRFRNLP
RVLQRATDAN CRYLDAILEQ YHQGRDNRLA YRIARRDAHN RDAELASVVS NMSSEPDVTA
ETREAAFRLL CLNHTFTSYI SALGAHREKL SNPDVLGLLD DAVCYVDDAL HHQPEDEQRV
HQALEGLKQR VQSLETRPDS KEPLVVQQIG LLIALLPEIG RLQRQISPPT STLITQP
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