| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1111 |
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| Symbol | ompA |
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| ID | 6482948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1121437 |
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| End bp | 1122513 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642736514 |
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| Product | outer membrane protein A |
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| Protein accession | YP_002040273 |
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| Protein GI | 194443312 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000109909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.00334653 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATGATA ACGAGGCGCA AAAAATGAAA AAGACAGCTA TCGCGATTGC AGTGGCACTG
GCTGGTTTCG CTACCGTAGC GCAGGCCGCT CCGAAAGATA ACACCTGGTA CGCTGGTGCT
AAACTGGGCT GGTCTCAGTA CCATGACACC GGCTTCATTA ACAATGATGG CCCAACTCAT
GAAAACCAAC TGGGCGCAGG TGCTTTTGGT GGTTACCAGG TTAACCCGTA CGTTGGCTTT
GAAATGGGCT ACGACTGGTT AGGCCGTATG CCGTACAAAG GCGACAACAT CAATGGCGCT
TATAAAGCTC AGGGCGTTCA GTTGACCGCT AAACTGGGTT ATCCAATCAC TGACGATCTG
GACGTTTATA CCCGTCTGGG TGGTATGGTA TGGCGTGCAG ACACCAAGTC TAACGTCCCT
GGCGGCCCGT CTACTAAAGA CCACGACACC GGCGTTTCCC CGGTATTCGC GGGCGGTATC
GAGTATGCTA TCACCCCTGA AATCGCAACC CGTCTGGAAT ACCAGTGGAC TAACAACATC
GGTGATGCCA ACACCATCGG CACCCGTCCG GACAACGGCC TGCTGAGCGT AGGTGTTTCC
TACCGTTTCG GCCAGCAAGA AGCTGCTCCG GTAGTAGCTC CGGCACCGGC ACCGGCTCCG
GAAGTACAGA CCAAGCACTT CACTCTGAAG TCTGACGTAC TGTTCAACTT CAACAAATCT
ACCCTGAAGC CGGAAGGCCA GCAGGCTCTG GATCAGCTGT ACAGCCAGCT GAGCAACCTG
GATCCGAAAG ACGGTTCCGT TGTCGTTCTG GGCTTCACTG ACCGTATCGG TTCTGACGCT
TACAACCAGG GTCTGTCCGA GAAACGTGCT CAGTCTGTTG TTGATTACCT GATCTCCAAA
GGTATTCCGT CTGACAAAAT CTCCGCACGT GGTATGGGCG AATCTAACCC GGTTACCGGC
AACACCTGTG ACAACGTGAA ACCTCGCGCT GCCCTGATCG ATTGCCTGGC TCCGGATCGT
CGCGTAGAGA TCGAAGTTAA AGGCGTTAAA GACGTGGTAA CTCAGCCGCA GGCTTAA
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| Protein sequence | MDDNEAQKMK KTAIAIAVAL AGFATVAQAA PKDNTWYAGA KLGWSQYHDT GFINNDGPTH
ENQLGAGAFG GYQVNPYVGF EMGYDWLGRM PYKGDNINGA YKAQGVQLTA KLGYPITDDL
DVYTRLGGMV WRADTKSNVP GGPSTKDHDT GVSPVFAGGI EYAITPEIAT RLEYQWTNNI
GDANTIGTRP DNGLLSVGVS YRFGQQEAAP VVAPAPAPAP EVQTKHFTLK SDVLFNFNKS
TLKPEGQQAL DQLYSQLSNL DPKDGSVVVL GFTDRIGSDA YNQGLSEKRA QSVVDYLISK
GIPSDKISAR GMGESNPVTG NTCDNVKPRA ALIDCLAPDR RVEIEVKGVK DVVTQPQA
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