Gene SNSL254_A1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1085 
Symbol 
ID6483207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1092649 
End bp1093191 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content57% 
IMG OID642736489 
Productbacteriophage lambda tail assembly protein I 
Protein accessionYP_002040248 
Protein GI194444636 
COG category[S] Function unknown 
COG ID[COG4723] Phage-related protein, tail component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.976904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGG GCTGGTATCA GGTCCGGATT GCCGGGAGCG ATATGGCGCC GGATACCCTT 
ACTGCCAGAC TGAACGAATC GTTACCGCCG GGGGCAGTGG TTCATATTGT ACCGCGTATG
GCGGGAGCGA AAAACGGTAT CTGGCAGGTG GTAGCCGGGG CAGCGCTGAT TGGCGCGTCA
TTTATTCCCG GTCTGAATGC TGTAGCGGCG GCAGTATTGT TTTCCGCAGG AACCAGTATG
GCGCTGGGTG GTGTGGCGCA GATGCTGACA CCTGTACCCA AAACACCGAC GGTGGGTCAG
GCAGATAACG GGAAACAGAA CACGTACTTT TCTTCCCTGG AAAATATGGT GGCCCAGGGG
AACCCGGTGC CGGTGTTGTA CGGTGAAATG AAAATCGGGT CACGGGTGAT ATCGCAGATG
ATGAGTACCC GGGATGAGAG CACGTCGGGA AAAGTTGTGG TGATCGGCTC CCCGTTACAG
GCAAACACCA CGTCGCGGCA GGACGGCGGG ATTACCAGAC CGTCTGTCGT CATCCGGCAG
TGA
 
Protein sequence
MNEGWYQVRI AGSDMAPDTL TARLNESLPP GAVVHIVPRM AGAKNGIWQV VAGAALIGAS 
FIPGLNAVAA AVLFSAGTSM ALGGVAQMLT PVPKTPTVGQ ADNGKQNTYF SSLENMVAQG
NPVPVLYGEM KIGSRVISQM MSTRDESTSG KVVVIGSPLQ ANTTSRQDGG ITRPSVVIRQ