Gene SNSL254_A1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1045 
Symbol 
ID6482214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1060622 
End bp1061731 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content52% 
IMG OID642736451 
Productgifsy-2 prophage RecT 
Protein accessionYP_002040210 
Protein GI194443314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.913175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00000406128 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAACA CAAATATTGT TACCACTGAG CAGCAGGCAC CAAACACCAT TTCTGCCAGT 
AACGCAATTT TTAACGTTCA GGCACTGGGT CAGTTAACAG CTTTCGCTAA CCTGATGGCA 
GACTCACAGG TGACGGTACC GGCACACCTT GCAGGGAAAC CAGCCGACTG TATGGCTATC 
GTCATGCAGG CTATGCAATG GGGCATGAAC CCTTACGCTG TGGCTCAGAA AACACACCTG 
GTTAACGGTG TTCTTGGTTA CGAGGCACAA CTGGTCAACG CAGTAATCGC AAGCTCCAGT 
GCCATTCATG GCCGTTTTCA TTACCGCTAT GGGGGTGACT GGGAGCGCTG CACCAGGACA 
CAGGAAATCA CACGCGATAA AAACGGTAAA AATGGGAAGT ACACCGTCAC TGAGCGCGTT 
CGTGGCTGGA CAGATGAGGA CGAGATCGGC CTGTTCGTTC AGGTTGGTGC CATTCTGCGA 
GGTGAATCTG AAATCACCTG GGGAGAACCT CTTTACCTCT CCGGCGTTGT TACCCGCAAT 
TCTCCGCTAT GGGTTTCAAA CCCTAAACAG CAAATTGCCT ATCTGGGCGT TAAATATTGG 
GCTCGCCTGT ACTGCCCGGA AGTGATCCTC GGCGTGTACA GCCCTGATGA GGTTGAGCAA 
CGAGAAGAAC GCGAGATTAA CCCTGCTCCA GTCCAGCGCA TGAGCGTACA GGAAATCACC 
AGCGAGGTTA GCACCAGGAC CAGCGCGCAG GAGTCGGCAG CTAACGTTGA TGCTGTTGCC 
GACGATCTTC GCGAACGCAT TGATACAGCA AGTTCCGTTG ATCAGGCAAA AGCAATCCGT 
GCGGATATCG AATCACAGAA AGCGTTGCTG GGTACTGCGC TGTTCACCGA ATTAAAAAAC 
AAAGCAGTGA AGCGCTATTA CCAGGTCGAT GCACAGAACA AAGTCGAGGC AGTGATCAAC 
TCAATTCCAA ACCCTGGCGA ACCGGAAGCC GCAGAGATGT TTGCTAAAGC TGAAAGCACG 
CTTGGCGCTG CTAAACGCCA TCTTGGCGAC GAACTGCACG ATAAGTACCG CGTCACCCTG 
GACGATATGA AACCGGAATA CATCGGCTAA
 
Protein sequence
MENTNIVTTE QQAPNTISAS NAIFNVQALG QLTAFANLMA DSQVTVPAHL AGKPADCMAI 
VMQAMQWGMN PYAVAQKTHL VNGVLGYEAQ LVNAVIASSS AIHGRFHYRY GGDWERCTRT 
QEITRDKNGK NGKYTVTERV RGWTDEDEIG LFVQVGAILR GESEITWGEP LYLSGVVTRN 
SPLWVSNPKQ QIAYLGVKYW ARLYCPEVIL GVYSPDEVEQ REEREINPAP VQRMSVQEIT 
SEVSTRTSAQ ESAANVDAVA DDLRERIDTA SSVDQAKAIR ADIESQKALL GTALFTELKN 
KAVKRYYQVD AQNKVEAVIN SIPNPGEPEA AEMFAKAEST LGAAKRHLGD ELHDKYRVTL 
DDMKPEYIG