Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1041 |
Symbol | pncB |
ID | 6486665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1057317 |
End bp | 1058519 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736447 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_002040206 |
Protein GI | 194446397 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0000300411 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACACAAT TCGCTTCTCC TGTTCTGCAC TCGTTGCTGG ATACAGATGC TTATAAATTG CATATGCAGC AAGCCGTTTT TCACCACTAC TATGATGTGC AGGTAGCGGC TGAGTTTCGT TGCCGTGGCG ACGACCTGCT GGGTATTTAT GCCGATGCTA TTCGCGAGCA GGTGGACGCG ATGCAGCACC TGCGCCTCCA GGAGGACGAG TTCCAGTGGC TCTCCGGCCT GCCCTTTTTT AAACCGGATT ATCTGAACTG GTTACGCGAG TTTCGCTATA ACCCAGCTCA AGTCTGTGTC ACCAACGATA ACGGCAAGCT GAATATTCGC TTAACCGGCC CGTGGCGTGA AGTCATTATG TGGGAAGTGC CGCTGCTGGC CGTGATCAGT GAGCTGGTTC ATCACTACCG CTCGCCAAAC GCGGGTGTTG ATCAGGCGCT CGACGCGCTG GAAAGTAAGC TGGTTGATTT CACTGCGTTA ACCGCCAATC TCGATATGTC CCGCTTCCAC CTGATGGACT TCGGCACCCG CCGCCGTTTC TCTCGTGAAG TGCAGCAGGC GATAGTTAAA CGTCTCCAGC AGGAGTCATG GTTCGTCGGC ACCAGCAACT ATGATCTCGC GCGTCGCCTG GCGCTGACGC CGATGGGCAC TCAGGCGCAC GAATGGTTCC AGGCGCATCA ACAAATCAGT CCGGACCTGG CGACCAGCCA GCGTGCCGCG TTGGCCGCCT GGCTTAACGA ATATCCGGAC CAGCTTGGTA TCGCCTTGAC AGATTGCATT ACAATGGATG CGTTTTTACG CGATTTCGGC ATTGAATTCG CCAGCCGTTA TCAGGGGTTA CGCCACGACT CAGGAGACCC TGTCGCATGG GGCGAAAAGG CGATTGCCCA TTATGAAAAG CTGGGGATTG ATCCGCTGAC AAAAACGCTG GTCTTTTCAG ATAACCTTGA TCTGCAAAAG GCGGTCGAGC TCTATCGCCA TTTCGCCTCT CGCGTGCAGT TAAGCTTCGG CATCGGTACC CGCCTGACCT GCGATATCCC TCAGGTAAAA CCGCTCAATA TCGTGATTAA ACTCGTGGAA TGTAACGGAA AGCCGGTGGC TAAACTTTCC GACAGCCCCG GTAAAACGAT CTGTCATGAT AAAGCGTTTG TGCGCGCGCT GCGTAAAGCG TTCGATCTCC CGCAGGTGCG TAAAGCAAGT TAA
|
Protein sequence | MTQFASPVLH SLLDTDAYKL HMQQAVFHHY YDVQVAAEFR CRGDDLLGIY ADAIREQVDA MQHLRLQEDE FQWLSGLPFF KPDYLNWLRE FRYNPAQVCV TNDNGKLNIR LTGPWREVIM WEVPLLAVIS ELVHHYRSPN AGVDQALDAL ESKLVDFTAL TANLDMSRFH LMDFGTRRRF SREVQQAIVK RLQQESWFVG TSNYDLARRL ALTPMGTQAH EWFQAHQQIS PDLATSQRAA LAAWLNEYPD QLGIALTDCI TMDAFLRDFG IEFASRYQGL RHDSGDPVAW GEKAIAHYEK LGIDPLTKTL VFSDNLDLQK AVELYRHFAS RVQLSFGIGT RLTCDIPQVK PLNIVIKLVE CNGKPVAKLS DSPGKTICHD KAFVRALRKA FDLPQVRKAS
|
| |