Gene SNSL254_A1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1036 
Symbol 
ID6482261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1053565 
End bp1054026 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content49% 
IMG OID642736442 
Productleucine regulator 
Protein accessionYP_002040201 
Protein GI194443985 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.923794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.000390599 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCTTG ACGCCTGGGA TAAAAACATT CTGACATTAT TGCAGCGCGA TAATCGTCTT 
TCTCAGCGGG AAATCGCCGA ACAGGTCAAT CTTTCACCTT CGGCAGTGAA TCGTCGTATC 
GCGGCACTGG AGGAGGCGGG CATAATTAAA GGCAATGTCA GCCTTATTGA TGCTGGCAAA 
GTGGGACGCC CGGTCACGAT TGTGGTGCAG GTGGTGATCG AAAACGAGCG ATTCAATTTA 
CTGGAAGAGG CTCGTCAACG GTTTGTCAGT TGCCCGCAGG TGCAGCAGGT CTACTACGTA 
ACGGGCGATT TCGACTTTTT ACTGGTGCTC AATGTTCGTG ACATGGCGGA ATATGAAACG 
CTTACCCGTG AGCTTTTCTT TTCCTCAGGC AATATAAAGT CTTTTAAAAC GATTGTCGTG 
ATGCAAAACG CCAAGCAAGA GATGCGCGTC CTGATCGAGT AA
 
Protein sequence
MKLDAWDKNI LTLLQRDNRL SQREIAEQVN LSPSAVNRRI AALEEAGIIK GNVSLIDAGK 
VGRPVTIVVQ VVIENERFNL LEEARQRFVS CPQVQQVYYV TGDFDFLLVL NVRDMAEYET 
LTRELFFSSG NIKSFKTIVV MQNAKQEMRV LIE