Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1024 |
Symbol | smtA |
ID | 6483255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1037885 |
End bp | 1038688 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642736430 |
Product | putative metallothionein SmtA |
Protein accession | YP_002040189 |
Protein GI | 194446491 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.144274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.551504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGATC GCAATTTTGA TGACATTGCT GAAAAGTTTT CCCGTAACAT TTACGGCACG ACCAAAGGAC AACTGCGGCA AGCCATTCTG TGGCAAGACC TGGATCGCGT GCTGGAGGAG ATTGGCGGGC GGAAACTGCG GGTGCTGGAT GCCGGCGGCG GCGAAGGGCA AACGGCGATT AAGATGGCGG AACGCGGCCA TCAGGTGACG TTATGCGATC TGTCTGGCGA AATGATCGCC CGCGCGCGGC AGGCGGCCGA GGCAAAAGGT GTGAGCAAAG ACATGCATTT TATACAATGC CCGGCTCAGG ACGTCGCTTC GCATTTGGAA AGCCCGGTTG ATCTGATATT GTTTCATGCT GTGCTGGAGT GGGTAGCCGA TCCTGTCGGC GTATTAGAAA CGCTCTGGTC AGTATTGCGC CCTGGCGGCG CGCTGTCGTT GATGTTCTAT AACGCTAACG GTTTGCTGAT GCACAATATG GTGGCGGGTA ATTTTGACTA CGTGCAGGCG GGGATGCCTA AACGCAAGAA GCGCACGCTG TCGCCTGACT ACCCGCGCCA CCCCGCGCAG GTTTACCAGT GGCTGGAGGC GATTGGCTGG CAGATTACCG GTAAAACCGG CGTGCGTGTG TTTCATGATT ATCTGCGTGA AAAACACCAG CAGCGTGACT GTTATGAGAC CCTGGTCGAA CTGGAAACGC GTTATTGCCG CCAGGAGCCG TATATTAGCC TTGGGCGCTA CATTCATGTC ACCGCGATTA AAAGCCCGGC GCTAGCCGCA GATGCAAGGA TAACCTATGA GTGA
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Protein sequence | MQDRNFDDIA EKFSRNIYGT TKGQLRQAIL WQDLDRVLEE IGGRKLRVLD AGGGEGQTAI KMAERGHQVT LCDLSGEMIA RARQAAEAKG VSKDMHFIQC PAQDVASHLE SPVDLILFHA VLEWVADPVG VLETLWSVLR PGGALSLMFY NANGLLMHNM VAGNFDYVQA GMPKRKKRTL SPDYPRHPAQ VYQWLEAIGW QITGKTGVRV FHDYLREKHQ QRDCYETLVE LETRYCRQEP YISLGRYIHV TAIKSPALAA DARITYE
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