Gene SNSL254_A1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1023 
Symbol 
ID6482732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1036973 
End bp1037749 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content56% 
IMG OID642736429 
Producthypothetical protein 
Protein accessionYP_002040188 
Protein GI194443111 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.14835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.458616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTA CGCTAAAGAA AGTGATTGGC GGTATGTTAT TGCCGCTTCC GCTGATGTTG 
CTGATCATTG GCGTCGGCCT GGCGCTGCTC TGGTTTAGCC GCTTTCAGAA GATCGGAAAA 
GTATTTATCA GCGTAGGTTG GCTGGCGCTA TTGCTATTAA GCCTGCAACC CGTCTCTGAC 
CATTTGCTGC GTCCGATAGA AAACCGCTAC CCTACCTGGC AGGGTCCGCA AAAGGTGGAA 
TATATTGTGG TTCTCGGCGG CGGCTATACC TGGAACCCGC AGTGGGCGCC GAGCTCTAAT 
TTAATTAACA ACAGCTTGCC GCGGCTGGCG GAAGGCATCC GGCTGTGGCG CGCGAATCCG 
GGAGCCAAGC TGATTTTTAC CGGCGGCGTA GCAAAAACCA ATACGGTAAG CACGGCGGAG 
GCCGGTGCGC GGGTGGCGCA GTCGCTGGGC GTACCGCGTA GCGATATTAT TACGCTGGAT 
AAACCAAAAG ATACGGAAGA AGAAGCCGCC GCCGTTAAGC AGGCCATCGG CGACGCCCCT 
TTCCTGTTGG TAACCTCCGC CTCGCATTTG CCGCGTGCGA TGATTTTCTT TCAGCATGCC 
GGGCTGAATC CGCTTCCCGC GCCGGCGAAT CAGTTGGCGA TCGATTCGCC GCTCAATCCC 
TGGGAGCGGG CAATTCCGTC CCCGGTCTGG CTGATGCACA GCGATCGCGC TGGGTATGAA 
ACATTAGGGC GACTTTGGCA ATGGCTGAAA GGCATATCAG GCAAGCCAGG GGAGTAA
 
Protein sequence
MLFTLKKVIG GMLLPLPLML LIIGVGLALL WFSRFQKIGK VFISVGWLAL LLLSLQPVSD 
HLLRPIENRY PTWQGPQKVE YIVVLGGGYT WNPQWAPSSN LINNSLPRLA EGIRLWRANP 
GAKLIFTGGV AKTNTVSTAE AGARVAQSLG VPRSDIITLD KPKDTEEEAA AVKQAIGDAP 
FLLVTSASHL PRAMIFFQHA GLNPLPAPAN QLAIDSPLNP WERAIPSPVW LMHSDRAGYE 
TLGRLWQWLK GISGKPGE