Gene SNSL254_A1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1022 
Symbol 
ID6485787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1036100 
End bp1036993 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content55% 
IMG OID642736428 
Producthypothetical protein 
Protein accessionYP_002040187 
Protein GI194442604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.521569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.540479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT TGCGGGCCGA ACTCAGTCAT TTGTTGGGTG AAAAACTTAG CCGTATAGAG 
TGCGTGAATG AGAAAGCGGA TTCCGCATTG TGGTCATTAT ATGACAGCCA GGGCATTCCG 
ATGCCGCTGA TGGCGCGAAG TTTTACCACT CCCGGCGTTG CGCAGCAACT GGCATGGAAA 
ACCTCAATGC TGGCGCGTAG CGGTACGGTG AGGATGCCGG TAATCTATGG CGTATTGACG 
CATGAAGAGC ATCCTGGTCC GGATGTGCTG CTACTGGAAC GACTGCGCGG TGTGCCGGTC 
GAGGCGCCGG CGCGCACTCC GGAACGCTGG GAACAGCTAA AAGATCAGAT TGTCGAAGGG 
CTGTTAGCCT GGCATCGGCA GGATAGCCGC GGTTGCGTTG GCGCCGTAGA CCATACTCAG 
GAGAATATCT GGCCTTCCTG GTATCGTCAG CGGGTGGAGG TGCTGTGGAC GACGCTAAAT 
CAGTTCAGCA ATACCGGTCT GACGATGCAG GACAGACGCA TTCTGTTTCG TACCAGAGAA 
TGTCTTCCTT CGTTATTTGA AGGGTTTAAC GACAACTGCG TACTGGTGCA TGGCAACTTC 
TGCCTGCGCA GTATGCTTAA AGACGCCCGT AGCGATCAGC TTCTGGCGAT GGTCGGCCCC 
GGGCTGATGC TGTGGGCGCC GAGAGAGTTC GAACTGTTTC GCCTGATGGA TAATCCATTG 
GCGGAGGGAT TGCTTTGGCA TTATCTGCAA CGCGCGCCAG TGGCGGAGTC CTTCATCTGG 
CGGCGTTGGC TCTATGTGCT GTGGGACGAG GTTGCGCAAT TGGTCAATAC CGGACGTTTT 
AACCGTACCA ATTTTGATCT GGCGGCGAAA TCATTACTCC CCTGGCTTGC CTGA
 
Protein sequence
MEQLRAELSH LLGEKLSRIE CVNEKADSAL WSLYDSQGIP MPLMARSFTT PGVAQQLAWK 
TSMLARSGTV RMPVIYGVLT HEEHPGPDVL LLERLRGVPV EAPARTPERW EQLKDQIVEG 
LLAWHRQDSR GCVGAVDHTQ ENIWPSWYRQ RVEVLWTTLN QFSNTGLTMQ DRRILFRTRE 
CLPSLFEGFN DNCVLVHGNF CLRSMLKDAR SDQLLAMVGP GLMLWAPREF ELFRLMDNPL 
AEGLLWHYLQ RAPVAESFIW RRWLYVLWDE VAQLVNTGRF NRTNFDLAAK SLLPWLA