Gene SNSL254_A1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1020 
Symbol 
ID6484759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1034964 
End bp1035146 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content46% 
IMG OID642736426 
Producthypothetical protein 
Protein accessionYP_002040185 
Protein GI194442769 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.678169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCATC GTCTGCTTGA AATCATCGCC TGCCCGGTAT GTAACGGCAA ACTCTGGTAT 
AACCAGGAAC AGCAAGAATT AATTTGCAAA CTGGATAATC TCGCTTTCCC GTTACGCGAC 
GGCATTCCTG TATTGCTGGA AAATGAAGCT CGCGCCCTGA CATCTGATGA GAGTAAATCA 
TGA
 
Protein sequence
MDHRLLEIIA CPVCNGKLWY NQEQQELICK LDNLAFPLRD GIPVLLENEA RALTSDESKS