Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1018 |
Symbol | lpxK |
ID | 6483704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1032659 |
End bp | 1033636 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642736424 |
Product | tetraacyldisaccharide 4'-kinase |
Protein accession | YP_002040183 |
Protein GI | 194446364 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.799043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCGC GTATCTGGTC GGGTGAATCC CCGCTATGGC GGTTACTGCT GCCGCTCTCC TGGCTGTATG GTCTGGTGAG CGGGGCGATT CGTCTGAGCT ATAAGCTTGG TTTTAAACGC GCCTGGCGAG CGCCGGTACC GGTGGTTGTG GTAGGGAATC TTACGGCTGG CGGTAACGGT AAAACCCCCG TAGTCATTTG GCTGGTGGAA AAGCTGCAAC AGCGTGGCGT GCGCGTGGGG GTTGTTTCCC GCGGCTACGG CGGGAAAGCT GCCGCTTATC CGCTGCTCCT GACGCCGGAG ACGACAACCG CAGAAGCGGG AGATGAACCG GTATTGATTT ATCAACGGAC CGGCGCGCCT GTCGCGGTGG CGCCTGAACG CGCCGCGGCG GTGAAAGCGA TTCTGGCGGC GCATAATGTG CAGATTATTA TCACCGACGA TGGGTTGCAG CATTACCGGC TCGCGCGAGA TATTGAAATT GTGGTGATTG ACGGCGTGCG CCGTTTTGGC AACGGCTGGT GGCTTCCTGC CGGTCCTATG CGCGAACGCG CCAGTCGCCT GAAAACCGTA GACGCCGCTA TCGTGAATGG CGGCGTCGCC CGGGCGGGCG AAATCCCCAT GCAGCTAGCG CCTGGACTGG CGGTGAACTT ACGTACGGGA GCGCGTTGCG ATGTGGCGCA ACTGAGCAAT ATTGTGGCGA TGGCGGGCAT CGGTCATCCG CCGCGCTTTT TCGCCACGCT GGAAGCCTGT GGCGCGCATC CGCAAAAGTG TGTCCCTCTG GCGGATCATC AAACGCTCGC CCCTGCTGAC GTTCAGGCGT TGGTCGGTGA AGGGCAGACC CTGGTAATGA CGGAAAAAGA CGCGGTGAAA TGCTGTGCTT TTGCCGAAGA TAACTGGTGG TTCTTACCGG TTGATGCGCG TTTGTCCGGT GAGCAGCCTG ATAAGTTGCT TGAACATATC ACCTCGCTGG TTCGCTAG
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Protein sequence | MIARIWSGES PLWRLLLPLS WLYGLVSGAI RLSYKLGFKR AWRAPVPVVV VGNLTAGGNG KTPVVIWLVE KLQQRGVRVG VVSRGYGGKA AAYPLLLTPE TTTAEAGDEP VLIYQRTGAP VAVAPERAAA VKAILAAHNV QIIITDDGLQ HYRLARDIEI VVIDGVRRFG NGWWLPAGPM RERASRLKTV DAAIVNGGVA RAGEIPMQLA PGLAVNLRTG ARCDVAQLSN IVAMAGIGHP PRFFATLEAC GAHPQKCVPL ADHQTLAPAD VQALVGEGQT LVMTEKDAVK CCAFAEDNWW FLPVDARLSG EQPDKLLEHI TSLVR
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