Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1010 |
Symbol | serC |
ID | 6484650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1021954 |
End bp | 1023042 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736416 |
Product | phosphoserine aminotransferase |
Protein accession | YP_002040175 |
Protein GI | 194443322 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGG TCTTTAATTT TAGTTCAGGT CCGGCGATGC TACCGGCGGA AGTACTTAAA CTGGCGCAAC AGGAGCTGTG TGACTGGCAC GGTCTTGGTA CGTCGGTAAT GGAAATTAGC CATCGAGGCA AAGAGTTTAT CCAGGTCGCT GAAGAGGCGG AGCAGGATTT TCGCGATCTC CTTAATATCC CCTCCAACTA TAAAGTCTTA TTTTGTCACG GCGGCGGTCG CGGGCAGTTT GCTGGCGTGC CGCTCAATCT GCTGGGCGAT AAAACCACGG CGGATTATGT CGATGCCGGT TACTGGGCGG CGAGCGCCAT CAAAGAAGCC AAAAAATACT GTGCGCCGCA GATTATCGAC GCCAAAATCA CCGTGGACGG CAAACGTGCC GTAAAACCGA TGCGCGAGTG GCAGCTTTCC GATAATGCCG CTTATTTGCA CTATTGCCCG AATGAGACCA TTGACGGCAT CGCCATCGAT GAAACGCCGG ATTTTGGCCC GGAGGTGGTC GTCACGGCGG ACTTTTCTTC TACCATCCTG TCTGCGCCGC TGGACGTCTC TCGCTATGGC GTAATTTATG CTGGCGCGCA GAAGAATATC GGTCCGGCAG GACTGACGCT GGTTATCGTC CGGGAGGATC TGTTAGGCAA GGCGCATGAG AGCTGCCCGT CCATCCTCGA CTACACCGTC CTGAATGATA ACGACTCGAT GTTTAATACG CCGCCGACTT TCGCCTGGTA TCTTTCCGGT CTGGTGTTCA AATGGTTGAA AGCGCAGGGC GGCGTGGCGG CGATGCACAA AATCAATCAG CAAAAAGCGG AGTTGCTGTA CGGTGTGATT GATAACAGCG ATTTCTACCG TAACGATGTC GCACAGGCCA ACCGTTCGCG GATGAATGTT CCGTTCCAGT TAGCGGACAA TACGCTGGAC AAGGTCTTTC TGGAAGAGTC TTTCGCCGCC GGTCTGCACG CCTTAAAAGG GCACCGTGTT GTTGGCGGTA TGCGCGCCTC TATTTATAAC GCCATGCCGA TTGAAGGGGT AAAAGCGCTG ACCGATTTCA TGATCGATTT TGAGCGTCGC CACGGCTAA
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Protein sequence | MAQVFNFSSG PAMLPAEVLK LAQQELCDWH GLGTSVMEIS HRGKEFIQVA EEAEQDFRDL LNIPSNYKVL FCHGGGRGQF AGVPLNLLGD KTTADYVDAG YWAASAIKEA KKYCAPQIID AKITVDGKRA VKPMREWQLS DNAAYLHYCP NETIDGIAID ETPDFGPEVV VTADFSSTIL SAPLDVSRYG VIYAGAQKNI GPAGLTLVIV REDLLGKAHE SCPSILDYTV LNDNDSMFNT PPTFAWYLSG LVFKWLKAQG GVAAMHKINQ QKAELLYGVI DNSDFYRNDV AQANRSRMNV PFQLADNTLD KVFLEESFAA GLHALKGHRV VGGMRASIYN AMPIEGVKAL TDFMIDFERR HG
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