Gene SNSL254_A1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1000 
SymboldmsC 
ID6482950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1008866 
End bp1009729 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content58% 
IMG OID642736406 
Productdmso reductase anchor subunit 
Protein accessionYP_002040165 
Protein GI194445042 
COG category[R] General function prediction only 
COG ID[COG3302] DMSO reductase anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGTG GATGGCATGA ATGGCCGTTG ATGATCTTCA CGGTCTTTGG TCAGTGCGTG 
GCCGGTGGTT TTATTGTTCT GGCTCTGGCG CTGATGAAGG GCGACCTGCG CGCGGAAACG
CAGCAGCGGG TGATCGCCTG TATGTTTGGT CTGTGGGTGC TGATGGGGAT TGGCTTTATC
GCCTCGATGC TGCATCTGGG CTCGCCGATG CGCGCGTTTA ACTCGCTTAA CCGCGTAGGT
GCTTCCGCAC TGAGCAATGA AATTGCCAGC GGCTCGGTGT TTTTTGCGGT CGGCGGGATT
GGCTGGCTGC TGGCGGTACT GAAAAAGCTG CCGCCGGCAC TGCGCACACT CTGGCTGATT
ATCACGATGG TACTGGGCGT CGTCTTCGTC TGGATGATGG TACGCGTCTA TAACAGCATC
GATACAGTAC CGACCTGGTA TAGCGTCTGG ACGCCGCTGG GCTTCTTCCT GACGCTCTTT
ATGGGTGGCC CGCTACTGGG TTATCTGCTG CTGCGCATCG CAGGCGTGAA CGGTTGGGCG
ATGCGTCTGT TGCCTGCGGT TTCGGTGCTG GCGCTGGTGG TTATTGCCAT TATGGTGGCC
ATGCAGGGCG CGGAACTGGC GACGATTCAC AGTTCCATTC AGCAGGCGTC TGCTCTGGTG
CCGGATTATG GTTCGCTGAT GGCCTGGCGT ATGGTGCTGC TTGCGGCGGC GTTGTGCTGC
TGGATTGTGC CACAGTTAAA AGGGTATCAA CCTGCGGTAC CGTTGCTCTC TGTCGCCTTC
ATTCTGATGC TGGCGGGGGA ATTGATTGGC CGCGGCGTAT TCTATGGGCT GCATATGACC
GTGGGCATGG CGGTAGCCAG TTAA
 
Protein sequence
MGSGWHEWPL MIFTVFGQCV AGGFIVLALA LMKGDLRAET QQRVIACMFG LWVLMGIGFI 
ASMLHLGSPM RAFNSLNRVG ASALSNEIAS GSVFFAVGGI GWLLAVLKKL PPALRTLWLI
ITMVLGVVFV WMMVRVYNSI DTVPTWYSVW TPLGFFLTLF MGGPLLGYLL LRIAGVNGWA
MRLLPAVSVL ALVVIAIMVA MQGAELATIH SSIQQASALV PDYGSLMAWR MVLLAAALCC
WIVPQLKGYQ PAVPLLSVAF ILMLAGELIG RGVFYGLHMT VGMAVAS