Gene SNSL254_A0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0997 
SymbolserS 
ID6486367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1004262 
End bp1005554 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content54% 
IMG OID642736403 
Productseryl-tRNA synthetase 
Protein accessionYP_002040162 
Protein GI194445741 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.964875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC CCAATCTGCT GCGTAATGAG CCAGACGCAG TCGCTGAAAA ACTGGCACGC 
CGGGGCTTTA AGCTGGATGT AGATAAGCTG CGCGCTCTTG AAGAGCGTCG TAAAGTTTTG
CAGGTCAACA CGGAAAACCT GCAGGCGGAG CGTAATTCTC GATCGAAATC CATCGGCCAG
GCGAAAGCGC GCGGGGAAGA TATCGAGCCT TTACGCCTGG AAGTGAATAA ACTGGGCGAA
GAGCTGGATG CGGCGAAAGC CGAGCTGGAT ACCTTGCTGG CGGAGATCCG CGATATCGCG
CTGACCATCC CAAACCTGCC TGCGGATGAA GTGCCGGTAG GTAAAGATGA AAACGACAAC
GTTGAAGTCA GCCGCTGGGG TACCCCGCGT GAATTTGATT TTGAAATCCG CGATCACGTC
ACCTTAGGGG AAATGCACTC CGGCCTCGAC TTTGCCGCCG CGGTTAAGCT GACCGGCTCC
CGTTTTGTGG TGATGAAAGG ACAGATTGCG CGTATGCATC GCGCATTGTC GCAGTTCATG
TTGGATCTGC ATACGGAACA GCACGGCTAT AGCGAAAACT ACGTGCCGTA TCTGGTTAAC
CACGACACGC TGTATGGCAC CGGTCAACTG CCGAAATTCG CAGGCGACTT GTTCCATACC
CGTCCGCTGG AAGAAGAAGC AGACAGCAGC AATTATGCTT TGATCCCGAC GGCGGAGGTT
CCGCTGACCA ATCTGGTACG CGATGAAATC ATCGACGAAG ATCAGCTGCC GATTAAAATG
ACGGCGCATA CGCCTTGTTT CCGTTCTGAA GCAGGTTCTT ATGGTCGTGA TACCCGTGGC
CTGATTCGTA TGCATCAGTT TGACAAAGTT GAGATGGTGC AGATCGTTCG CCCGGAAGAT
TCTATGGCTG CGTTGGAAGA GATGACCGGC CACGCGGAAA AAGTGCTCCA GCTACTGGGA
CTGCCGTACC GTAAAATCAT TCTGTGCACT GGCGATATGG GCTTCGGCGC CTGCAAAACC
TATGACCTCG AAGTCTGGGT TCCGGCGCAG AATACCTACC GCGAGATCTC TTCCTGCTCT
AACGTCTGGG ACTTCCAGGC GCGTCGTATG CAGGCACGCT GTCGCAGCAA GTCCGACAAA
AAGACCCGTC TGGTCCATAC CCTGAATGGT TCTGGTCTGG CGGTAGGTCG TACCCTGGTG
GCCGTGATGG AAAACTATCA GCAGGCTGAT GGCCGCATTG AAGTGCCGGA AGTATTACGT
CCGTACATGA ACGGACTGGA ATATATCGGC TAA
 
Protein sequence
MLDPNLLRNE PDAVAEKLAR RGFKLDVDKL RALEERRKVL QVNTENLQAE RNSRSKSIGQ 
AKARGEDIEP LRLEVNKLGE ELDAAKAELD TLLAEIRDIA LTIPNLPADE VPVGKDENDN
VEVSRWGTPR EFDFEIRDHV TLGEMHSGLD FAAAVKLTGS RFVVMKGQIA RMHRALSQFM
LDLHTEQHGY SENYVPYLVN HDTLYGTGQL PKFAGDLFHT RPLEEEADSS NYALIPTAEV
PLTNLVRDEI IDEDQLPIKM TAHTPCFRSE AGSYGRDTRG LIRMHQFDKV EMVQIVRPED
SMAALEEMTG HAEKVLQLLG LPYRKIILCT GDMGFGACKT YDLEVWVPAQ NTYREISSCS
NVWDFQARRM QARCRSKSDK KTRLVHTLNG SGLAVGRTLV AVMENYQQAD GRIEVPEVLR
PYMNGLEYIG