| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0990 |
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| Symbol | cydD |
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| ID | 6483839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 993791 |
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| End bp | 995557 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642736396 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_002040155 |
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| Protein GI | 194442502 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.305306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA CCCGTCAAAA AGAGCTGACC CGCTGGTTAA AACAGCAAAG CGTAATCTCC
CAACGGTGGT TGAATATTTC CCGCCTGTTG GGGTTCATGA GTGGCGTATT AATTGTCGCT
CAGGCCTGGA TCATGGCGCG TATCCTGCAA CATATGATCA TGGAGAACAT TCCACGGGAA
GCGCTGTTGC TCCCTTTTAT CCTGCTGATA CTGGTCTTTG TCCTCCGCGC CTGGGTGGTG
TGGTTGCGCG AGCGCGTCGG TTTTCATGCC GGACAACATA TTCGCTTTGA GATCCGCCGT
CAGGTGTTGG ATCGTCTGCA GCAAGCCGGC CCAGCCTGGA TTCAGGGCAA GCCCGCCGGT
AGCTGGGCGA CGCTGGTATT GGAACAGATT GACGATATGC ATGACTATTA TGCGCGCTAT
CTGCCGCAAA TGGCGCTTGC CGTTTGCGTA CCGCTCTTAA TCGTGGCGGC GATTTTCCCG
TCAAATTGGG CGGCGGCGCT GATTCTGCTG GGCACCGCCC CGCTCATTCC CCTATTTATG
GCGATGGTGG GGATGGGCGC GGCTGACGCC AACCGCCGCA ATTTCCTGGC GCTTGCCCGG
CTAAGCGGCC ATTTTCTTGA CCGTCTGCGC GGGATGGAAA CGCTGCGAAT TTTCGGTCGT
GGAGAAGCGG AAACCGAGAG CATTCGCGCA GCATCGCAGG ATTTTCGTCA GCGCACGATG
GAAGTACTGC GCCTCGCCTT TTTATCTTCC GGCGTGCTGG AATTTTTCAC CTCGCTTTCT
ATTGCGCTGG TCGCCGTTTA TTTTGGCTTC TCTTACCTGG GCGAGCTGAA CTTTGGTCAT
TACGGTACCG GCGTGACGCT GGCCGCCGGG TTCCTCGCCT TGATCCTCGC GCCGGAGTTT
TTCCAGCCAT TACGCGACCT CGGCACGTTT TATCATGCTA AGGCGCAGGC GGTTGGCGCG
GCGGATAGTC TGAAGACATT TCTGGAAACA CCCCTCGCCC ACCCGGCGCG CGGCGAAGTT
GAGCTGGCGG AAAACGAACC TGTAACCATT GACGCAGTCA ATCTTATTAT CACCTCGCCA
GAAGGCAAAA CGCTTGCCGG GCCGCTGAAT TTCTCATTAG CGGCACGAGA ACGCGCCGTC
CTGGTAGGAC GCAGCGGTTC CGGTAAAAGC TCTCTGTTGA ATGTATTATC CGGTTTTCTC
TCCTATCAGG GATCTTTGCG TATTAACGGT GTCGAGCTTC GCGATCTCTC GCCGGAATCC
TGGCGCCAGC ATCTCTCCTG GGTTGGGCAA AACCCGCAAT TACCTGCAGC GACGCTACGC
GAAAATGTAT TACTGGCGCG CCCGGACGCC AGCGAGCAGG AACTTTATGC CGCGCTTGAC
GCCGCATGGG TAAGCGAGTT TTTACCGCTG CTGCCGCAGG GAGTAGACAC CCCGCTCGGC
AATCATGCCA GCAGACTTTC CGTCGGCCAG GCACAGCGTG TAGCGGTCGC CCGTGCGCTA
CTTAATCCCT GTCAACTGCT ACTGCTGGAT GAACCGGCGG CAAGCCTGGA CGCTCACAGC
GAGCAACGCG TCATGCAGGC GTTAAAAGCG GCGTCAAAAC GCCAGACCAC ATTAATGGTG
ACGCATCAGT TGGAAGATCT CGCCGACTGG GACGCTATCT GGGTTATGCA AGATGGCGCG
ATTGTCGAAC AAGGCAGTTA TGCTGAACTC AGCGCCGCCA ACGGCGCTTT TGCGACGTTA
TTGGCTCACC GTCAGGAGGA TATTTAA
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| Protein sequence | MNKTRQKELT RWLKQQSVIS QRWLNISRLL GFMSGVLIVA QAWIMARILQ HMIMENIPRE
ALLLPFILLI LVFVLRAWVV WLRERVGFHA GQHIRFEIRR QVLDRLQQAG PAWIQGKPAG
SWATLVLEQI DDMHDYYARY LPQMALAVCV PLLIVAAIFP SNWAAALILL GTAPLIPLFM
AMVGMGAADA NRRNFLALAR LSGHFLDRLR GMETLRIFGR GEAETESIRA ASQDFRQRTM
EVLRLAFLSS GVLEFFTSLS IALVAVYFGF SYLGELNFGH YGTGVTLAAG FLALILAPEF
FQPLRDLGTF YHAKAQAVGA ADSLKTFLET PLAHPARGEV ELAENEPVTI DAVNLIITSP
EGKTLAGPLN FSLAARERAV LVGRSGSGKS SLLNVLSGFL SYQGSLRING VELRDLSPES
WRQHLSWVGQ NPQLPAATLR ENVLLARPDA SEQELYAALD AAWVSEFLPL LPQGVDTPLG
NHASRLSVGQ AQRVAVARAL LNPCQLLLLD EPAASLDAHS EQRVMQALKA ASKRQTTLMV
THQLEDLADW DAIWVMQDGA IVEQGSYAEL SAANGAFATL LAHRQEDI
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