| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0976 |
|---|
| Symbol | |
|---|
| ID | 6483215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 980220 |
|---|
| End bp | 981338 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642736382 |
|---|
| Product | macrolide transporter subunit MacA |
|---|
| Protein accession | YP_002040142 |
|---|
| Protein GI | 194442427 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 92 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCTA AGGGAAAGAA ATTTAAAAAG CGTTATCTGG TCATTATTTT AATTCTTTTA
GTGGGGGGGA TGGCTGGCTG GCGAATGATA AATGCCCCGC TGCCAACTTA TCAGACATTA
ATCGTGCGGC CAGGCGATCT TGAACAGAGT GTACTGGCGA CTGGAAAACT GGACGCGTTG
CGTAAAGTGG ATGTCGGCGC GCAGGTGAGC GGCCAGTTGA AAACGCTGCT GGTCTCCATT
GGCGATAACG TTAAAAAAGA TCAGCTACTC GGCGTGATTG ACCCAGATCA GGCGGAGAAC
CAGATAAAAG AGGTCGAGGC CACCCTGATG GAGCTGAACG CGGAGCGTCA GCAGGCAGCC
GCTGAGTTAA AGCTGGCGCG GGTTACGCTG GCGCGCCAGC AGCAGTTAGC TAAGACTCTG
GCGGTATCGC AACAGGATCT GGATACCGCG GCGACGGAGA TGGCGGTTAA ACAGGCGCGT
ATTGGCACCA TAGATGCCCA GATCAAACGT AATCGGGCCT CGTTGGACAC CGCGAAAACC
AACCTGGAAT ATACCCGTAT TGTTGCCCCC ATGGCGGGGG AAGTGACGCA AATCACTACC
CTGCAAGGAC AAACGGTGAT TGCAGCTCAG CAGGCGCCCA ATATTCTGAC GCTGGCGGAT
ATGAGCACCA TGCTGGTAAA AGCGCAGGTC TCGGAAGCGG ACGTGATCCA TCTTCGGGCG
GGGCAGAAAG CATGGTTCAC CATTGCAGGC GATCCGCAAA CGCGCTATGA AGGCGTTTTA
AAAGATATTC TGCCGACGCC GGAAAAGATC AACGACGCTA TTTTTTATTA CGCCCGGTTT
GAAGTGCCGA ATCCCAAAAG AATCTTGCGT CTTGATATGA CCGCACAGGT TTATATTCAA
CTCATGGATG TCAAAAATGT GCTGATTATT CCTCTCGCCG CGCTTGGCGA ACCGGTGGGC
GGCAATCGTT ATAAAGTGGC GCTGTTGCGT AACGGTGAAA AACGTGAGCG CGAAGTGGTC
ATTGGCGAGC GTAACGATAC AGACGTAGAA GTGGTTAAAG GTCTGGAAGC GGGCGATGAG
GTGATCATCG GTGAGAGCAG GCCAGGAGCG ACGCCATGA
|
|---|
| Protein sequence | MRAKGKKFKK RYLVIILILL VGGMAGWRMI NAPLPTYQTL IVRPGDLEQS VLATGKLDAL
RKVDVGAQVS GQLKTLLVSI GDNVKKDQLL GVIDPDQAEN QIKEVEATLM ELNAERQQAA
AELKLARVTL ARQQQLAKTL AVSQQDLDTA ATEMAVKQAR IGTIDAQIKR NRASLDTAKT
NLEYTRIVAP MAGEVTQITT LQGQTVIAAQ QAPNILTLAD MSTMLVKAQV SEADVIHLRA
GQKAWFTIAG DPQTRYEGVL KDILPTPEKI NDAIFYYARF EVPNPKRILR LDMTAQVYIQ
LMDVKNVLII PLAALGEPVG GNRYKVALLR NGEKREREVV IGERNDTDVE VVKGLEAGDE
VIIGESRPGA TP
|
|---|
| |