Gene SNSL254_A0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0969 
SymbolltaE 
ID6483866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp970676 
End bp971677 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content60% 
IMG OID642736375 
ProductL-threonine aldolase 
Protein accessionYP_002040135 
Protein GI194444583 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATT TACGCAGTGA TACCGTTACC CGACCGAGCC GTGCCATGCT CGAGGCGATG 
ATGACCGCTC CGGTCGGGGA CGACGTATAC GGCGATGACC CTACCGTTAA CGCCCTTCAG
CGCTACGCCG CCGACCTTTC CGGTAAAGAA GCGGCGCTTT TTTTACCCAC CGGCACCCAG
GCCAATCTGG TCGCGCTGCT TAGCCATTGT GAACGCGGCG AAGAGTATAT CGTCGGTCAG
GGCGCGCATA ATTATCTCTA TGAAGCTGGC GGCGCGGCGG TGCTCGGCAG CATTCAGCCG
CAGCCCATCG ACGCCGCCGC GGACGGTACG CTGCCGCTGG AGAACGTGGC GGCGAAGATT
AAAGCGGATG ACATCCACTT CGCGCGCACG CGCTTGCTCA GTCTGGAAAA TACGCATAAC
GGGAAAGTGC TGCCGCGCGC GTATCTGAAA GACGCCTGGA CATTTACCCG CGAACGTGGA
CTGGCGCTGC ACGTTGACGG CGCCCGAATT TTTAACGCGG TGGTTGCCTA CGGCTGTGAG
TTAAAAGAGA TTACGCAGTA TTGCGACTCT TTTACCATCT GCCTGTCAAA AGGTCTCGGA
ACGCCGGTCG GTTCACTGCT GGTCGGCAAC CGCGATTACA TTAAACGCGC GACGCGCTGG
CGTAAAATGG TCGGCGGCGG AATGCGTCAG GCCGGGATTC TGGCAGCGGC CGGACTGTAT
GCGCTGAAGC ATAACGTGGC GCGTCTGCAA GAGGATCATG ATAACGCCGC CTGGCTGGCG
CAGCAGCTTC GGGAAGCGGG CGCGGAGGTC ATGCGCCACG AAACGAATAT GCTGTTTGTT
CGCGTTGGCG AAGCACAGGC CGCCGCGCTT GGCGACTATT TGCGGGAACG GAATATCCTG
ATTAACGCCG CGCCGATTGT GCGTCTGGTG ACGCATCTGG ATGTCTCTCG CGAACAGCTT
GCCGATGTCG TCGCCCACTG GCGCGCCTTT TTAGCCCGCT AA
 
Protein sequence
MIDLRSDTVT RPSRAMLEAM MTAPVGDDVY GDDPTVNALQ RYAADLSGKE AALFLPTGTQ 
ANLVALLSHC ERGEEYIVGQ GAHNYLYEAG GAAVLGSIQP QPIDAAADGT LPLENVAAKI
KADDIHFART RLLSLENTHN GKVLPRAYLK DAWTFTRERG LALHVDGARI FNAVVAYGCE
LKEITQYCDS FTICLSKGLG TPVGSLLVGN RDYIKRATRW RKMVGGGMRQ AGILAAAGLY
ALKHNVARLQ EDHDNAAWLA QQLREAGAEV MRHETNMLFV RVGEAQAAAL GDYLRERNIL
INAAPIVRLV THLDVSREQL ADVVAHWRAF LAR