| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0953 |
|---|
| Symbol | potI |
|---|
| ID | 6486415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 956011 |
|---|
| End bp | 956856 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642736360 |
|---|
| Product | putrescine transporter subunit: membrane component of ABC superfamily |
|---|
| Protein accession | YP_002040120 |
|---|
| Protein GI | 194444644 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 109 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACT TACCGGTCGT TCGCTCGCCC TGGCGCATTC TGATTCTGGT GCTGGGGTTT
ACTTTTCTCT ATGCGCCGAT GTTAATGTTG GTGATTTACT CGTTTAACAG TTCGAAGCTG
GTGACGGTGT GGGCGGGATG GTCGACGCGC TGGTATGGCG AGCTCTTTCG GGATACCGCC
ATGATGAGCG CAGTGGGACT AAGCCTGACA ATTGCCGCCT GCGCGGCGAC GATGGCGGTG
GTGCTCGGTA CTATTGCTGC GGTGGTGATG GTGCGATTTG GACGATTTCG CGGCGCAAAC
GGCTTTGCGT TTATGATCAC CGCGCCGCTG GTGATGCCGG ATGTGATTAC CGGGCTGTCG
CTGCTGCTGC TGTTTGTCGC GCTCGGTCAT GCTATCGGCT GGCCCTCCGA TCGCGGGATG
CTGACCATCT GGTTGGCGCA CGTCACTTTC TGTACCGCCT ATGTGGCAGT GGTGATCGCT
TCGCGATTAC GCGAACTGGA TCGTTCGATT GAAGAGGCGG CGATGGATCT TGGCGCGGCG
CCGTTGAAGG TCTTTTTCGT CATTACGTTA CCGATGATCA TGCCAGCGGT GATCTCGGGC
TGGCTGTTGG CCTTTACGCT TTCCCTTGAC GATCTGGTGA TTGCCAGCTT CGTTTCCGGT
CCCGGTGCCA CCACGCTACC GATGCTGGTT TTCTCCAGCG TGCGCATGGG CGTGAACCCG
GAAATCAACG CGCTGGCGAC GTTAATCCTC GGCGTGGTAG GAATCGTCGG ATTTATTGCC
TGGTACCTGA TGGCGCGAGC GGAAAAACAG CGGATTCGCG ATATCCAGCG TGCAAGACGC
GGCTGA
|
|---|
| Protein sequence | MNNLPVVRSP WRILILVLGF TFLYAPMLML VIYSFNSSKL VTVWAGWSTR WYGELFRDTA
MMSAVGLSLT IAACAATMAV VLGTIAAVVM VRFGRFRGAN GFAFMITAPL VMPDVITGLS
LLLLFVALGH AIGWPSDRGM LTIWLAHVTF CTAYVAVVIA SRLRELDRSI EEAAMDLGAA
PLKVFFVITL PMIMPAVISG WLLAFTLSLD DLVIASFVSG PGATTLPMLV FSSVRMGVNP
EINALATLIL GVVGIVGFIA WYLMARAEKQ RIRDIQRARR G
|
|---|
| |