Gene SNSL254_A0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0951 
SymbolpotG 
ID6483457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp953918 
End bp955051 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content54% 
IMG OID642736358 
Productputrescine transporter ATP-binding subunit 
Protein accessionYP_002040118 
Protein GI194445758 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGATG TCCCCCACCG CCCGCAGGTG AAAACCCGTA AAGCGCTGAC GCCGCTTCTG 
GAAATTCGCA ACCTGACGAA GTCATTCGAC GGGCAACATG CTGTCGATGA TGTCAGTCTG
ACTATCTATA AAGGCGAGAT TTTTGCCCTG CTGGGCGCGT CAGGTTGTGG AAAATCGACT
CTGCTACGGA TGCTGGCAGG TTTTGAACCG CCGAGCAGCG GGCAAATTAT GCTCGACGGC
GTCGATCTGG CGCATGTTCC GCCGTATCAG CGTCCGATTA ATATGATGTT TCAGTCCTAT
GCGTTGTTTC CGCATATGAC GGTAGAGCAG AACATCGCTT TTGGTCTGAA GCAGGACAAA
CTGCCGAAGG CGGAGATTAC CAGCCGCGTC AATGAGATGC TGGGTCTGGT GCACATGCAG
GAGTTTGCAA AACGTAAGCC GCATCAGCTT TCCGGCGGTC AGCGCCAGCG CGTGGCCCTG
GCGCGCAGCC TGGCGAAACG TCCTAAACTG CTCTTGTTGG ATGAACCGAT GGGCGCGCTG
GATAAAAAAT TACGCGACCG GATGCAGCTT GAAGTGGTGG ATATCCTTGA GCGCGTCGGC
GTGACCTGCG TCATGGTGAC GCACGATCAG GAAGAAGCGA TGACGATGGC GGGGCGCATT
GCCATCATGA ACCGTGGAAA ATTTGTGCAA ATTGGCGAAC CGGAGGAGAT TTACGAGCAT
CCGACGACCC GCTATAGCGC CGAATTTATC GGATCGGTAA ATGTTTTTGA GGGCTTACTG
AAAGCGCGTG AAGAGGACGG TCTGGTCATT GACGCGCCCG GTTTGGTTCA TCCGTTAAAA
GTCGATGCGG ATGCCTCTGT CGTTGATAAT GTGCCGGTAT ATGTGGCGCT ACGTCCGGAA
AAAATCATGC TGTGTGAGTC GCCGCCTGCC GATGGCTATA ATTTCGCCGT CGGCGAAGTG
GCGCATATTG CGTATCTCGG CGATCTGTCT ATTTATCATG TGCGGCTAAA AAGCGGGCAG
ATGATCAGCG CTCAACTGCA GAATGCGCAC CGTTACCGGA AAGGGTTACC GACCTGGGGC
GATGAAGTGC GTTTGTGCTG GGAAGCGGAT AGCTGCGTGG TCCTGACGGT ATAA
 
Protein sequence
MNDVPHRPQV KTRKALTPLL EIRNLTKSFD GQHAVDDVSL TIYKGEIFAL LGASGCGKST 
LLRMLAGFEP PSSGQIMLDG VDLAHVPPYQ RPINMMFQSY ALFPHMTVEQ NIAFGLKQDK
LPKAEITSRV NEMLGLVHMQ EFAKRKPHQL SGGQRQRVAL ARSLAKRPKL LLLDEPMGAL
DKKLRDRMQL EVVDILERVG VTCVMVTHDQ EEAMTMAGRI AIMNRGKFVQ IGEPEEIYEH
PTTRYSAEFI GSVNVFEGLL KAREEDGLVI DAPGLVHPLK VDADASVVDN VPVYVALRPE
KIMLCESPPA DGYNFAVGEV AHIAYLGDLS IYHVRLKSGQ MISAQLQNAH RYRKGLPTWG
DEVRLCWEAD SCVVLTV