Gene SNSL254_A0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0939 
Symbol 
ID6482262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp944115 
End bp944930 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content52% 
IMG OID642736347 
Productphosphatase YbjI 
Protein accessionYP_002040107 
Protein GI194443778 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCA AATTAATCGC CGTCGACATG GACGGCACGT TTCTGAGCGA TCAAAAAACC 
TATAACCGTG ACCGGTTTAT GGCGCAGTAC CAACAAATGA AGCGGCAAGG CATTCGCTTT
GTCGTGGCCA GCGGCAACCA GTATTACCAG TTAATCTCCT TCTTTCCGGA AATTGCGCAC
GAAATCGCTT TTGTCGCGGA AAACGGCGGC TGGGTGGTCA GCGAAGGCGA GGATATTTTT
AACGGCGAGC TGACAAAAGC CGACTTCCAG GCGGTTGTCG AACACCTGCT CACACGCGCC
GATGTGGAGA TCATCGCCTG TGGAAAAAAC AGCGCCTACA CGCTGAAACG GTACGACGAT
GCGTTAAAAG CCGTTGCGGC AATGTATTAT CATCGTCTGG AGTTTGTGGA TAATTTCAAC
AATATCAGCG ATGTTTTTTT CAAATTCGGC CTTAATATTA CCGATGAACG GATACCGGAA
GTACAGGCGG CGCTGCACGA CGCCATTGGC GATATCATGG TCCCCGTTCA TACCGGCTAT
GGCAGTATTG ATTTAATAAT TCCCGGCGTG CATAAAGCCA ACGGCCTGCG TCTGTTACAG
CAGCGCTGGG GCATTCATGA TAGTGAAGTG GTGGTATTCG GCGACGGCGG CAACGATATT
GAGATGCTGC GTCAGGCCGG GTTTAGTTTT GCCATGTCGC ACGCCAGCGA AGCGGTCGCG
GCGGCGGCGA AATACCGCGC CGGATCGAAC AATCAGGAAG GCGTGCTGGA TATCATCGAC
AGCGTATTAA ACAACGAGCC GCCGTTCAAC GTCTAG
 
Protein sequence
MSIKLIAVDM DGTFLSDQKT YNRDRFMAQY QQMKRQGIRF VVASGNQYYQ LISFFPEIAH 
EIAFVAENGG WVVSEGEDIF NGELTKADFQ AVVEHLLTRA DVEIIACGKN SAYTLKRYDD
ALKAVAAMYY HRLEFVDNFN NISDVFFKFG LNITDERIPE VQAALHDAIG DIMVPVHTGY
GSIDLIIPGV HKANGLRLLQ QRWGIHDSEV VVFGDGGNDI EMLRQAGFSF AMSHASEAVA
AAAKYRAGSN NQEGVLDIID SVLNNEPPFN V