Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0893 |
Symbol | glnP |
ID | 6486075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 899779 |
End bp | 900438 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642736305 |
Product | glutamine ABC transporter permease protein |
Protein accession | YP_002040065 |
Protein GI | 194445368 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.110521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTTG ACTGGAGCGC CATCTGGCCC GCCATTCCGC TTTTACTTGA GGGCGCTAAA ATGACCCTGT GGATCTCGGT CCTCGGTCTG GCTGGCGGCC TGGTTATTGG ACTGGCGGCA GGTTTTGCCC GTACGTTTGG CGGCTGGTTC GCCAACCACA TCGCCCTGGT TTTCATTGAA ATTATTCGCG GCACGCCCAT CGTTGTCCAG GTCATGTTTA TCTACTTTGC CCTGCCGATG GCATTTAATG ATTTGCGTAT TGATCCATTC AGCGCAGCGG TCGTGACAAT TATGATTAAC TCCGGCGCTT ATATCGCGGA AATTACTCGT GGCGCAGTAC TATCCATTCA CAAAGGTTTT CGCGAAGCGG GTCTGGCGCT GGGCCTTTCT CGCCGGGAAA CCATCCGCCA TGTTATTTTA CCGCTTGCTC TGCGCCGTAT GCTGCCGCCG CTGGGCAACC AGTGGATCAT TAGCATCAAA GACACCTCGT TGTTTATTGT TATCGGCGTA GCCGAGCTGA CCCGTCAGGG CCAGGAAATT ATTGCCGGTA ACTTTCGCGC CCTGGAAATC TGGAGCGCCG TGGCCGTCTT CTATTTGATC ATTACGCTGG TGCTGAGCTT TATTTTGCGT CGTCTTGAAA GAAGGATGAA AATCCTGTGA
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Protein sequence | MQFDWSAIWP AIPLLLEGAK MTLWISVLGL AGGLVIGLAA GFARTFGGWF ANHIALVFIE IIRGTPIVVQ VMFIYFALPM AFNDLRIDPF SAAVVTIMIN SGAYIAEITR GAVLSIHKGF REAGLALGLS RRETIRHVIL PLALRRMLPP LGNQWIISIK DTSLFIVIGV AELTRQGQEI IAGNFRALEI WSAVAVFYLI ITLVLSFILR RLERRMKIL
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