Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0891 |
Symbol | |
ID | 6483041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 896719 |
End bp | 898941 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736303 |
Product | hypothetical protein |
Protein accession | YP_002040063 |
Protein GI | 194443832 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.482788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTGGA CCCTGTTCAT CCTTTTTTGT CTACTGGGCA CGCCTGCCCA TGCGGTCGCC ATACCCGGCG TGACCACGGG GACATCAACC AGCCAGCAAG CAGCGCCAGA GCCCAGTCCT GAACAAAAAA AAGCGGCCTA TGCGGCCCTG GCTGACGTAC TGGAGAACGA GGCTTCACGT AACGAATTGA TAGCGCAACT CCGCGAAGCC TCAACCACGC CGCCGACCGA GCCGGCGCCA GCGCTTGCGC CGCCTGCGGC CAAAGATGAG AAAACGGTAC TGGAGAACGT CACCACCATT ACCCGTCAGT ACGGCGATGC TTTCGCTACC CGTTTCGCCC AGCTTTATCG CAACATCACC GATGCGCCGC ACAAGCCATT TAACTCGCAA ACCTTCACCA ACGCGTTAAC CCACTTTTTA TTTCTGGCCG TCGCGGTATT TGGTTTTTAT AGCGTGATAC GGCTTTGCGC CCTGCCGTTA TATCGAAAAA TGGGCCTGTG GGCGCGCAAG AAAAACCGTG AACGCAGCAA CTGGTTACAG CTCCCGGCGA TGATCGTCGG CGCGTTTATT ATCGACCTGC TGCTACTGGC GCTCACCTTA TTTATCGGTC AGATGCTCAG TGATAATTTC CATGCCGGAA GTCGAACTAT CGCTTTTCAG CAAAGCCTGT TCCTGAATGC CTTCGCGCTG ATAGAGTTCT TTAAAGCGAT TCTGCGGCTT ATTTTTTGCC CTAATGTACC GGAATTACGC CCATTCGCGA TTCAGGATGC GACAGCGCGT TACTGGAATC GCCGTATGAG TTCCCTTAGC AGTTTGATTG GCTACGGGCT AATTGTTGCC GTTCCGATTA TTTCCAACCA GGTGAATGTT CAGGTTGGCG CGATGGCTAA TGTGGCGATC ATGCTCTGCA TCACCATCTG GGCGCTGTAC CTGATCTTTA AAAACAAAGC GGAGATTACG CAACATTTAT TAAGCCTGGC GGAACGATCA TTAGCCTTTT TTAGCCTGTT TATCCGCGCC TTTGCGCTGG TGTGGCACTG GCTGGCCAGC GCTTACTTTA TCGTGCTGTT TTTCTTCTCG TTATTCGACC CAGGCAATAG CCTGAAGTTT ATGATGGGCG CGACCGTGCG CAGTCTGGCG ATTATTGGCA TCGCCGCGTT TATCTCCGGT ATGTTTACCC GCTGGATAGC GAAAACCATC ACCCTGTCGC CCCATACGCA GCGCAATTAC CCGGAATTAC AAAAGCGGCT TAACGGCTGG CTCTCCTCGG CGCTAAAAGT CGCACGCTTT TTGACCGTCT GCGTCGCCGT TATGCTGTTG CTCAACGCCT GGGGATTATT CGATTTCTGG CACTGGCTAC ATTATGGCGC GGGGGAAAAG ATGGTCGATA TCCTCATCCG TATCGCGTTA ATCTTATTCT TCTCCGCCGT GGGATGGACG ATTCTCGCCA GTCTGATTGA GAATCGCCTG GCCTCCGATA TTCATGGTCG CCCGCTACCC AGCGCCCGCA CGCGCACGCT GCTGACGCTG TTCCGCAATG CGCTGGCAGT GATTATCAGT ACCATAACCA TCATGATCGT GTTATCGGAA ATCGGCGTCA ATATCGCGCC ATTGCTGGCT GGCGCGGGCG CGTTAGGTCT GGCTATCTCT TTCGGTTCGC AAACTCTGGT GAAAGATATT ATTACCGGCG TTTTTATTCA GTTTGAAAAC GGGATGAATA CCGGCGACTT AGTCACCATA GGCCCGCTGA CGGGGACGGT CGAAAGAATG TCGATTCGTT CCGTCGGCGT GCGGCAGGAT ACCGGGGCAT ACCATATTAT CCCGTGGTCC TCGATCACCA CTTTCGCCAA CTTTGTGCGC GGTATCGGCT CTGTTGTCGC CAACTATGAC GTGGATCGCC ATGAGGATGC GGATAAAGCG AATCAGGCGC TGAAAGACGC GGTAACGGCG CTGATGGAGA CGGAGGATAT TCGCGGGCTG ATTATCGGCG AACCCACGTT CGCCGGTATT GTCGGTTTAA CGAACACGGC GTTTACTTTA CGCGTGTCGT TCACCACGCT ACCGCTCAAG CAGTGGACGG TGCGTTTTGC CCTTGATAGC CAGGTGAAAA AGCATTTTGA TCTGGCTAAT GTGCGCGCGC CGGTGCAAAC GTATCAGGTT CTGCCCGCCC CCGCCGGCGG CCCGCCGCCT GATTCACTGC CGCCGCGCGA ACCGACGATT TAG
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Protein sequence | MRWTLFILFC LLGTPAHAVA IPGVTTGTST SQQAAPEPSP EQKKAAYAAL ADVLENEASR NELIAQLREA STTPPTEPAP ALAPPAAKDE KTVLENVTTI TRQYGDAFAT RFAQLYRNIT DAPHKPFNSQ TFTNALTHFL FLAVAVFGFY SVIRLCALPL YRKMGLWARK KNRERSNWLQ LPAMIVGAFI IDLLLLALTL FIGQMLSDNF HAGSRTIAFQ QSLFLNAFAL IEFFKAILRL IFCPNVPELR PFAIQDATAR YWNRRMSSLS SLIGYGLIVA VPIISNQVNV QVGAMANVAI MLCITIWALY LIFKNKAEIT QHLLSLAERS LAFFSLFIRA FALVWHWLAS AYFIVLFFFS LFDPGNSLKF MMGATVRSLA IIGIAAFISG MFTRWIAKTI TLSPHTQRNY PELQKRLNGW LSSALKVARF LTVCVAVMLL LNAWGLFDFW HWLHYGAGEK MVDILIRIAL ILFFSAVGWT ILASLIENRL ASDIHGRPLP SARTRTLLTL FRNALAVIIS TITIMIVLSE IGVNIAPLLA GAGALGLAIS FGSQTLVKDI ITGVFIQFEN GMNTGDLVTI GPLTGTVERM SIRSVGVRQD TGAYHIIPWS SITTFANFVR GIGSVVANYD VDRHEDADKA NQALKDAVTA LMETEDIRGL IIGEPTFAGI VGLTNTAFTL RVSFTTLPLK QWTVRFALDS QVKKHFDLAN VRAPVQTYQV LPAPAGGPPP DSLPPREPTI
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