Gene SNSL254_A0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0890 
Symbol 
ID6483825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp895796 
End bp896722 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content55% 
IMG OID642736302 
Productputative SAM-dependent methyltransferase 
Protein accessionYP_002040062 
Protein GI194442902 
COG category[R] General function prediction only 
COG ID[COG3129] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCC AGAAACCGGG GTTACACCCG CGCAACCGCC ATCAACACCG TTATGATCTC 
GCCGCACTGT GTCAGACCAC GCCGGAATTG ACGTCCTTTC TTATCCGCAC GCCCGCCGGT
GAACAGAGCG TTGATTTTGC TAATCCGCAA GCGGTAAAAG CGCTCAATAA GGCATTGCTG
GCGCATTTTT ATGCCGTCAC ACACTGGGAC ATTCCGCCAG GGTTTTTATG TCCGCCGGTG
CCTGGTCGTG CGGATTATAT CCATCATCTG GCGGATCTGC TTGGCGAAAC GACAGGGAGT
ATTCCGGCGC AGGCAACTAT TCTGGACGTG GGCGTGGGCG CCAATTGTAT TTATCCGCTT
ATCGGCGTCC ATGAATATGG CTGGCGATTT ACCGGTAGTG AAGTCAGCGA CGCAGCGATG
TCCAGCGCGC AGGCTATCAT TCAGGCTAAT ACGGGGTTAA GCCGCGCCAT TCGTCTGCGT
CGGCAAAAAG ATCCGGCGGC CATTTTTACC GGTATCATTC ATAAAAATGA ATTTTATGAC
GCAACGCTTT GTAACCCGCC TTTTCACGAC TCCGCCGCCG CAGCCCGCGC GGGCAGCGAG
CGTAAGCGCC GCAATTTGGG GCAGAATAAA GATGATGCGC TGAACTTTGG CGGTCAACAG
CAGGAGCTAT GGTGCGAAGG CGGCGAAGTC GCCTTTATTA AAAAAATGAT TGCTGAAAGC
CAATCCTTCC GCCGTCAGGT GTTGTGGTTT ACGACGTTGG TGTCGCGCGG CGAGAATTTA
CCGCCGCTTT ACCGGGCGTT GACGGAGGCT GGCGCGGTGA AAGTGGTGAA AAAAGAGATG
GCCCAGGGGC AAAAGCAAAG CCGCTTTATT GCCTGGACCT TTATGGATGA CGACCAGCGT
CGCCGTTTTA TCACCCGTAA ACGCTAA
 
Protein sequence
MSAQKPGLHP RNRHQHRYDL AALCQTTPEL TSFLIRTPAG EQSVDFANPQ AVKALNKALL 
AHFYAVTHWD IPPGFLCPPV PGRADYIHHL ADLLGETTGS IPAQATILDV GVGANCIYPL
IGVHEYGWRF TGSEVSDAAM SSAQAIIQAN TGLSRAIRLR RQKDPAAIFT GIIHKNEFYD
ATLCNPPFHD SAAAARAGSE RKRRNLGQNK DDALNFGGQQ QELWCEGGEV AFIKKMIAES
QSFRRQVLWF TTLVSRGENL PPLYRALTEA GAVKVVKKEM AQGQKQSRFI AWTFMDDDQR
RRFITRKR