| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0863 |
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| Symbol | |
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| ID | 6485122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 871296 |
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| End bp | 873563 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642736275 |
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| Product | leucine-rich repeat protein |
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| Protein accession | YP_002040035 |
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| Protein GI | 194445572 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATA TTACTAATAT ACAATCTACG GCAAGGCATC AAAGTATTAG CAATGAGGCA
TCAACAGAGG TGCCTTTAAA AGAAGAGATA TGGAATAAAA TAAGTGCCTT TTTCTCTTCA
GAACATCAGG TTGAAGCACA AAGCTGCATC GCTTATCTTT GTCATCCACC TGAAACCGCC
TCGCCAGAAG AGATCAAAAG CAAGTTTGAA TGTTTAAGGA TGTTAGCTTT CCCGGCGTAT
GCGGATAATA TTCAGTATAG TAGAGGAGGG GCAGACCAAT ACTGTATTTT GAGTGAAAAT
AGTCAGGAAA TTCTGTCTAT AGTTTTTAAT ACAGAGGGCT ATACCGTTGA GGGAGGGGGA
AAGTCAGTCA CCTATACCCG TGTGACAGAA AGCGAGCAGG CGAGTAGCGC TTCCGGCTCC
AAAGATGCTG TGAATTATGA GTTAATCTGG TCTGAGTGGG TAAAAGAGGC GCCAGCGAAA
GAGGCAGCAA ATCGTGAAGA AGCCGTACAA CGGATGCGTG ACTGCCTGAA AAATAATAAG
ACGGAACTTC GTCTGAAAAT ATTAGGACTT ACCACTATAC CTGCCTATAT TCCTGAGCAG
ATAACTACTC TGATACTCGA TAACAATGAA CTGAAAAGTT TGCCGGAAAA TTTACAGGGA
AATATAAAGA CCCTGTATGC CAACAGTAAT CAGCTAACCA GTATCCCTGC CACGTTACCG
GATACCATAC AGGAAATGGA GCTGAGCATT AACCGTATTA CTGAATTGCC GGAACGTTTG
CCTTCAGCGC TTCAATCGCT GGATCTTTTC CATAATAAAA TTAGTTGCTT ACCTGAAAAT
CTACCTGAGG AACTTCGGTA CCTGAGCGTT TATGATAACA GCATAAGGAC ACTGCCAGCA
CATCTTCCGT CAGGGATTAC CCATTTGAAT GTGCAGAGTA ATTCGTTAAC CGCTTTGCCT
GAAACATTGC CGCCGGGCCT GAAGACTCTG GAGGCCGGCG AAAATGCCTT AACCAGTCTG
CCCGCATCGT TACCACCAGA ATTACAGGTC CTGGATGTAA GTAAAAATCA GATTACGGTT
CTGCCTGAAA CACTACCTCC CACGATAACA ACGCTGGATG TTTCCCGTAA CGCATTGACT
AATCTACCGG AAAACCTCCC GGCGGCATTA CAAATAATGC AGGCCTCTCG CAATAACCTG
GTCCGTCTCC CGGAGTCGTT ACCCCATTTT CGTGGTGAAG GACCTCAACC TACAAGAATA
ATCGTAGAAT ATAATCCTTT TTCAGAACGA ACAATACAGA ATATGCAGCG GCTAATGTCC
TCTGTAGATT ATCAGGGACC CCGGGTATTG TTTGCCATGG GCGACTTTTC AATTGTTCGG
GTAACTCGAC CACTGCATCA AGCTGTCCAG GGGTGGCTAA CCAATCTCGA GGAGGAAGAC
GTCAACCAAT GGCGGGCGTT TGAGACGGAA GTAAACGCGG CAGCCTTCAG CATGTTTCTG
GATCGTCTTA GCGATACGCA GAACACCCGA CACCCGGATT TTAAGGAACA AGTCTCCGCC
TGGCTAATGC GCCTGGCTGA AGATAGCGCA CTAAGAGAAA CCGCATTTAT TATAGCGATG
GGTGCAACGA TAAGCTGTGA AGATCGGGTC ACACTGGCAT ACCACCAAAT GCAGGAAGCG
ACGTTGGTTC ATGATGCTGA AAGAGGCGCC TTTGATAGCC ACTTAGCGGA ACTGATTATG
GCGGGGCGTG AAATCTTTCG GCTGGAGCAA ATAGAATCGC TCGCCAGAGA AAAGGTAAAA
CGGCTGTTTT TTATTGACGA AGTCGAAGTA TTTCTGGGTT TTCAGAATCA GTTACGAGAG
TCGCTGTCGC TGACAACAAT GACCCAGGAT ATGCGATTTT ATAACGTTTC TGGTATCACT
GAGTCTGACC TGGACGAGGC GGAAATAAGG ATAAAAATTG CTGAAAATAG GGATTTTCAC
AAATGGTTTG CGCTGTGGGG GCCGTGGCAT AAAGTGCTGG AGCGTATAGC GCCAGAAGAG
TGGCGTGAAA TGATGGCCAA AAGGGCTGAG TGTATTGAAA CGGATGAGTA TCAGAGCCGG
GTCAATGCTG AACTGGAAGC GTTAGGAATA GCAGGTGATC CTGACGCAGA GCGCATGGCT
GGAATGCGGA TAATGGAAGA GATCAATCAG ACCCTCTTTA CTGAGATCAT GGAGAATATA
TTGCTGAAAA AAGAGGTGAG CTCGCTCATG AGCGCCTACT GGCGATAG
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| Protein sequence | MFNITNIQST ARHQSISNEA STEVPLKEEI WNKISAFFSS EHQVEAQSCI AYLCHPPETA
SPEEIKSKFE CLRMLAFPAY ADNIQYSRGG ADQYCILSEN SQEILSIVFN TEGYTVEGGG
KSVTYTRVTE SEQASSASGS KDAVNYELIW SEWVKEAPAK EAANREEAVQ RMRDCLKNNK
TELRLKILGL TTIPAYIPEQ ITTLILDNNE LKSLPENLQG NIKTLYANSN QLTSIPATLP
DTIQEMELSI NRITELPERL PSALQSLDLF HNKISCLPEN LPEELRYLSV YDNSIRTLPA
HLPSGITHLN VQSNSLTALP ETLPPGLKTL EAGENALTSL PASLPPELQV LDVSKNQITV
LPETLPPTIT TLDVSRNALT NLPENLPAAL QIMQASRNNL VRLPESLPHF RGEGPQPTRI
IVEYNPFSER TIQNMQRLMS SVDYQGPRVL FAMGDFSIVR VTRPLHQAVQ GWLTNLEEED
VNQWRAFETE VNAAAFSMFL DRLSDTQNTR HPDFKEQVSA WLMRLAEDSA LRETAFIIAM
GATISCEDRV TLAYHQMQEA TLVHDAERGA FDSHLAELIM AGREIFRLEQ IESLAREKVK
RLFFIDEVEV FLGFQNQLRE SLSLTTMTQD MRFYNVSGIT ESDLDEAEIR IKIAENRDFH
KWFALWGPWH KVLERIAPEE WREMMAKRAE CIETDEYQSR VNAELEALGI AGDPDAERMA
GMRIMEEINQ TLFTEIMENI LLKKEVSSLM SAYWR
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