Gene SNSL254_A0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0859 
SymbolbioF 
ID6485803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp865559 
End bp866716 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content61% 
IMG OID642736271 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_002040031 
Protein GI194446519 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.123721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGGC AACAACGCGT CGACGATGCG CTGACGGCGC GTCGGGCGAC GGATACGTTG 
CGCCGCCGCT ATGTGGTGTC GCAGGGCGCC GGACGCTGGC TGGTAGCGAA CGGGCGACAG
TATCTTAACT TCTCCAGCAA TGATTACCTC GGCTTAAGTC AACACCCGCA GATTATTCGC
GCCTGGCAAC AGGCAGCGAC GCGTTTTGGC GTCGGCAGCG GCGGGTCGGG TCATATCAGC
GGTTATTCCG TGGCGCACCA GGCGTTAGAG GTGGAACTGG CGCAATGGTT AGAATATCCA
CGCGCGCTGC TGTTTATCTC TGGCTTTGCG GCGAATCAGG CGGTCATTAC CGCCTTAATG
AAAAAAAATG ACCGGATTGT GGCCGACAGG TTGAGTCATG CTTCCCTGCT GGAGGCCGCC
AATCTGAGTC CGGCGCAGCT TCGCCGCTTT ATCCATAACG ATACGCAGCA TCTGTCGCGT
TTACTGCAAT CGCCCTGCGT GGGTCAGCAA CTGGTGGTGA CAGAAGGTGT ATACAGCATG
GACGGCGACA GCGCGCCGCT GGCGGAAATC CAGCACATTG CCCGCAGGCA TCATGCCTGG
CTGTTGGTTG ATGATGCGCA CGGCATCGGC GTGACTGGCG ATGAGGGGAG GGGCACCTGC
TGGCAACGGG GGGTGAAGCC TGAGTTGCTG GTGGTGACTT TCGGTAAGGG ATTTGGCGTC
AGCGGCGCAG CGGTGCTCTG CTCGGAAAGC GTCGCGGATT ATCTGCTGCA ATTCGCCCGT
CATCTGGTTT ACAGCACCAG TATGCCGCCC GCCCAGGCGC AGGCGTTAAG CGCCTCGCTG
GCGGTGATCC GTAGCGATGA AGGTCGTGAA CGGCGCGAAA AACTCGCCGC TCTGGTTCAG
CGCTTTCGGG CCGGCGTTAA CGCGTCCCGA TTTACGCTAC TGAATGCCCA TAGCGCCATC
CAGCCGTTAA TCGTGGGCGA TAACAGCCGT GCATTGCGCC TGGCGGAGGC GCTGCGTCAA
CAAGGATGCT GGGCGACGGC AATTCGCCCG CCGACGGTGC CTGTCGGTAC GGCGCGCCTG
CGCTTAACGT TAACGCAGGC GCATGAAGCG TGCGATATCG ACCGTCTGCT GGAGGTGCTG
CATGGCGCAG GTGAATAA
 
Protein sequence
MSWQQRVDDA LTARRATDTL RRRYVVSQGA GRWLVANGRQ YLNFSSNDYL GLSQHPQIIR 
AWQQAATRFG VGSGGSGHIS GYSVAHQALE VELAQWLEYP RALLFISGFA ANQAVITALM
KKNDRIVADR LSHASLLEAA NLSPAQLRRF IHNDTQHLSR LLQSPCVGQQ LVVTEGVYSM
DGDSAPLAEI QHIARRHHAW LLVDDAHGIG VTGDEGRGTC WQRGVKPELL VVTFGKGFGV
SGAAVLCSES VADYLLQFAR HLVYSTSMPP AQAQALSASL AVIRSDEGRE RREKLAALVQ
RFRAGVNASR FTLLNAHSAI QPLIVGDNSR ALRLAEALRQ QGCWATAIRP PTVPVGTARL
RLTLTQAHEA CDIDRLLEVL HGAGE