Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0859 |
Symbol | bioF |
ID | 6485803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 865559 |
End bp | 866716 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642736271 |
Product | 8-amino-7-oxononanoate synthase |
Protein accession | YP_002040031 |
Protein GI | 194446519 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.123721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTGGC AACAACGCGT CGACGATGCG CTGACGGCGC GTCGGGCGAC GGATACGTTG CGCCGCCGCT ATGTGGTGTC GCAGGGCGCC GGACGCTGGC TGGTAGCGAA CGGGCGACAG TATCTTAACT TCTCCAGCAA TGATTACCTC GGCTTAAGTC AACACCCGCA GATTATTCGC GCCTGGCAAC AGGCAGCGAC GCGTTTTGGC GTCGGCAGCG GCGGGTCGGG TCATATCAGC GGTTATTCCG TGGCGCACCA GGCGTTAGAG GTGGAACTGG CGCAATGGTT AGAATATCCA CGCGCGCTGC TGTTTATCTC TGGCTTTGCG GCGAATCAGG CGGTCATTAC CGCCTTAATG AAAAAAAATG ACCGGATTGT GGCCGACAGG TTGAGTCATG CTTCCCTGCT GGAGGCCGCC AATCTGAGTC CGGCGCAGCT TCGCCGCTTT ATCCATAACG ATACGCAGCA TCTGTCGCGT TTACTGCAAT CGCCCTGCGT GGGTCAGCAA CTGGTGGTGA CAGAAGGTGT ATACAGCATG GACGGCGACA GCGCGCCGCT GGCGGAAATC CAGCACATTG CCCGCAGGCA TCATGCCTGG CTGTTGGTTG ATGATGCGCA CGGCATCGGC GTGACTGGCG ATGAGGGGAG GGGCACCTGC TGGCAACGGG GGGTGAAGCC TGAGTTGCTG GTGGTGACTT TCGGTAAGGG ATTTGGCGTC AGCGGCGCAG CGGTGCTCTG CTCGGAAAGC GTCGCGGATT ATCTGCTGCA ATTCGCCCGT CATCTGGTTT ACAGCACCAG TATGCCGCCC GCCCAGGCGC AGGCGTTAAG CGCCTCGCTG GCGGTGATCC GTAGCGATGA AGGTCGTGAA CGGCGCGAAA AACTCGCCGC TCTGGTTCAG CGCTTTCGGG CCGGCGTTAA CGCGTCCCGA TTTACGCTAC TGAATGCCCA TAGCGCCATC CAGCCGTTAA TCGTGGGCGA TAACAGCCGT GCATTGCGCC TGGCGGAGGC GCTGCGTCAA CAAGGATGCT GGGCGACGGC AATTCGCCCG CCGACGGTGC CTGTCGGTAC GGCGCGCCTG CGCTTAACGT TAACGCAGGC GCATGAAGCG TGCGATATCG ACCGTCTGCT GGAGGTGCTG CATGGCGCAG GTGAATAA
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Protein sequence | MSWQQRVDDA LTARRATDTL RRRYVVSQGA GRWLVANGRQ YLNFSSNDYL GLSQHPQIIR AWQQAATRFG VGSGGSGHIS GYSVAHQALE VELAQWLEYP RALLFISGFA ANQAVITALM KKNDRIVADR LSHASLLEAA NLSPAQLRRF IHNDTQHLSR LLQSPCVGQQ LVVTEGVYSM DGDSAPLAEI QHIARRHHAW LLVDDAHGIG VTGDEGRGTC WQRGVKPELL VVTFGKGFGV SGAAVLCSES VADYLLQFAR HLVYSTSMPP AQAQALSASL AVIRSDEGRE RREKLAALVQ RFRAGVNASR FTLLNAHSAI QPLIVGDNSR ALRLAEALRQ QGCWATAIRP PTVPVGTARL RLTLTQAHEA CDIDRLLEVL HGAGE
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