| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0858 |
|---|
| Symbol | bioB |
|---|
| ID | 6483302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 864522 |
|---|
| End bp | 865562 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642736270 |
|---|
| Product | biotin synthase |
|---|
| Protein accession | YP_002040030 |
|---|
| Protein GI | 194445747 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0502] Biotin synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00433] biotin synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.353933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCC ACCCACGCTG GACACTGTCG CAAGTAACCG AATTATTTGA AAAACCACTG
CTGGAATTGC TGTTTGAAGC GCAGCAAATT CATCGCCAGC ATTTCGATCC GCAGCAGGTA
CAGGTTAGTA CGCTGCTGTC GATCAAAACC GGCGCCTGCC CGGAGGATTG TAAATACTGC
CCGCAGAGCT CGCGCTATAA AACCGGGCTG GAAGCCGAGC GTTTAATGGA AGTAGAGCAG
GTACTGGACT CCGCCCGTAA AGCGAAAAAC GCTGGTTCGA CCCGCTTCTG TATGGGGGCG
GCCTGGAGGA ATCCGCATGA ACGCGATATG CCTTATCTGG AGAAGATTGT ACAGGGCGTC
AAAGCTATGG GGCTGGAAAC CTGTATGACG CTCGGCATGT TGAACGAGAG CCAGGCGCAG
CGTCTGGCTA ACGCCGGGCT GGATTACTAC AACCACAACC TCGATACCTC GCCGGAGTTT
TACGGCAATA TCATCACTAC CCGTACCTAT CAGGAGCGCC TCGACACGCT GGAAAAAGTC
CGTGAAGCAG GGATTAAAGT GTGCTCCGGC GGCATTGTGG GTCTGGGCGA AACGGTTACC
GATCGCGCCG GACTGTTGTT GCAGTTGGCG AACCTGCCGA CACCGCCGGA AAGCGTGCCA
ATCAACATGC TGGTGAAGGT AAAAGGCACG CCGCTTGCGG ATAACGATGA CGTGGATGCG
TTTGATTTTA TTCGTACTAT CGCCGTGGCG CGCATCATGA TGCCGACCTC ATACGTGCGT
CTTTCCGCAG GGCGTGAACA GATGAACGAG CAGACCCAGG CGATGTGCTT TATGGCCGGG
GCGAACTCGA TTTTCTATGG CTGCAAATTG TTAACTACGC CAAATCCGGC AGAGGACAAG
GATCTGCAGT TATTCCGTAA GCTGGGGCTG AATCCGCAGC AGACCAGGGT GCTGGCGGGC
GATAACGAGC AGCAGCAACG TCTGGAGCAG ACGCTGATGA CGCCTGACAC CGATGATTAT
TACAACGCGG CAGCCTTATG A
|
|---|
| Protein sequence | MARHPRWTLS QVTELFEKPL LELLFEAQQI HRQHFDPQQV QVSTLLSIKT GACPEDCKYC
PQSSRYKTGL EAERLMEVEQ VLDSARKAKN AGSTRFCMGA AWRNPHERDM PYLEKIVQGV
KAMGLETCMT LGMLNESQAQ RLANAGLDYY NHNLDTSPEF YGNIITTRTY QERLDTLEKV
REAGIKVCSG GIVGLGETVT DRAGLLLQLA NLPTPPESVP INMLVKVKGT PLADNDDVDA
FDFIRTIAVA RIMMPTSYVR LSAGREQMNE QTQAMCFMAG ANSIFYGCKL LTTPNPAEDK
DLQLFRKLGL NPQQTRVLAG DNEQQQRLEQ TLMTPDTDDY YNAAAL
|
|---|
| |