Gene SNSL254_A0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0849 
Symbol 
ID6486682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp853532 
End bp854527 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content56% 
IMG OID642736261 
Product6-phosphogluconolactonase 
Protein accessionYP_002040021 
Protein GI194446085 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA CAGTCTATAC CGCCAGCCCT GAGAGTCAGC AAATTCACGT CTGGAGCCTG 
AACCACGAAG GGACGCTGAC GCTGGTGCAG GTCGTGGATG TGCCCGGTCA GGTTCAGCCG
ATGGTGGTCA GTCCGGATAA ACGCTACCTC TATGTCGGCG TGCGCCCGGA GTTTCGTGTC
CTGGCGTATC GTATTGCGCC GGATGATGGC GCGCTGACGT TTGCCGCCGA ATCCGCCCTG
CCGGGTAGCC CGACCCATAT TTCTACCGAT CATCATGGTC GTTTTGTCTT TGTCGGATCG
TATAACGCCG GTAATGTCAG CGTGACGCGC TTACAGGATG GCCTGCCGGT TGAGTTGGTG
GATGTGGTGG AGGGGCTGGA CGGCTGCCAC TCGGCAAATA TTACGCCTGA TAACCGTACC
CTGTGGGTGC CTGCGCTAAA ACAGGATCGC ATTTGTCTGT TTACGCTAAG CGATGACGGC
CATCTGGTGG CCCAGGAGCC GGCGGAAGTA AATACGGTTG AAGGGGCAGG CCCGCGTCAT
ATGGTCTTCC ACCCGAATCG ACAATATGCG TATTGCGTCA ATGAACTGAA CAGTTCGGTG
GATGTCTGGC AGCTTAAAAA TCCGCATGGC GAGATAGAGT GCGTGCAAAC GCTGGATATG
ATGCCCGCCG ATTTTTCCGA TACCCGCTGG GCGGCGGATA TTCATATTAC GCCGGATGGA
CGGCATCTGT ATGCCTGTGA CCGCACCGCC AGTCTGATTA CCGTCTTTAG TGTCTCCGAA
GATGGCAGCG TACTGAGCGT TGAAGGCTTC CAGCCGACGG AAGCCCAACC GCGCGGCTTT
AATATCGACA ATAGCGGAAA ATACCTGATT GCAGCGGGTC AAAAATCACA TCATATCGCG
GTCTATGAAA TTACGGGCAC TCAGGGGTTG CTGACGGAAA AAGGCCGTTA TGCCGTCGGC
CAGGGGCCAA TGTGGGTTGT AGTGAACGCG TACTAA
 
Protein sequence
MKQTVYTASP ESQQIHVWSL NHEGTLTLVQ VVDVPGQVQP MVVSPDKRYL YVGVRPEFRV 
LAYRIAPDDG ALTFAAESAL PGSPTHISTD HHGRFVFVGS YNAGNVSVTR LQDGLPVELV
DVVEGLDGCH SANITPDNRT LWVPALKQDR ICLFTLSDDG HLVAQEPAEV NTVEGAGPRH
MVFHPNRQYA YCVNELNSSV DVWQLKNPHG EIECVQTLDM MPADFSDTRW AADIHITPDG
RHLYACDRTA SLITVFSVSE DGSVLSVEGF QPTEAQPRGF NIDNSGKYLI AAGQKSHHIA
VYEITGTQGL LTEKGRYAVG QGPMWVVVNA Y