Gene SNSL254_A0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0832 
Symbol 
ID6483377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp836270 
End bp837571 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content65% 
IMG OID642736244 
Productoxaloacetate decarboxylase beta chain 
Protein accessionYP_002040004 
Protein GI194446069 
COG category[C] Energy production and conversion 
COG ID[COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 
TIGRFAM ID[TIGR01109] sodium ion-translocating decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTC TGAACGCCCT GCTTCAGGGC ATGGGGCTGA TGCACCTTGG CGCAGGCCAG 
GCCATCATGC TGCTGGTGAG CCTGCTGCTG CTGTGGCTGG CGATAGCGAA GAAGTTCGAA
CCGCTGCTGC TGCTGCCGAT TGGCTTCGGC GGCCTGCTCT CCAACATCCC GGAAGCGGGT
ATGGCGCTGA CCGCGCTGGA AAGCCTGCTG GCGCATCACG ACGCCGGGCA GCTGGCGGTG
ATTGCCGCGA AGCTCAACTG CACGCCGGAC GTGCACGCCA TCAAGGAAGC GCTGGCCCTT
GCTCTGCCGT CGGTGCAGAG CCAGATGGAG AACCTGGCGG TGGACATGGG CTACACGCCG
GGGGTGCTGG CGCTGTTCTA TAAAGTGGCG ATTGGCTCCG GCGTCGCGCC GCTGGTCATC
TTTATGGGCG TCGGCGCGAT GACCGACTTC GGCCCGCTGC TGGCCAACCC GCGCACCCTG
CTGCTCGGCG CGGCGGCGCA GTTCGGCATC TTCGCCACGG TGCTGGGGGC GCTGACGCTG
AACTACTTCG GCCTGATTGC CTTCACCCTG CCGCAGGCGG CGGCCATCGG CATTATCGGC
GGCGCGGACG GTCCGACGGC CATTTACCTG TCGGGCAAGC TGGCGCCGGA GCTGCTGGGG
GCCATCGCGG TGGCGGCGTA CTCGTATATG GCGCTGGTGC CGTTAATCCA GCCGCCGATT
ATGAAGGCGC TGACCACGGA GACGGAGCGG AAAATCCGCA TGGTGCAGCT GCGCACGGTG
AGTAAGCGGG AAAAAATCCT CTTCCCGGTG GTGCTGTTAC TGCTGGTGGC GCTGCTGCTG
CCGGACGCCG CGCCGCTGCT GGGGATGTTC TGCTTTGGCA ATCTGATGCG TGAAAGCGGC
GTGGTGGAGC GTCTGAGCGA CACGGTGCAG AACGGGCTGA TTAATAGCGT GACCATTTTC
CTCGGGCTGT CGGTGGGCGC CAAGCTGGTG GCGGACAAGT TCCTGCAACC GCAGACGCTG
GGCATTCTGC TGCTGGGGGT GGTTGCGTTC GGTATCGGCA CCGCCGCCGG GGTGCTGATG
GCGAAGCTGC TGAACCTGTG CAGTAAGAAC AAAATCAACC CGCTGATTGG CTCCGCCGGC
GTGTCGGCAG TGCCGATGGC GGCCCGCGTA TCGAACAAGG TGGGGCTGGA GTCGGACCCG
CAGAACTTCC TGCTGATGCA CGCGATGGGC CCGAACGTGG CGGGGGTGAT TGGTTCGGCC
ATTGCGGCGG GCGTGATGCT GAAGTACGTG CTGGCGATGT AA
 
Protein sequence
MESLNALLQG MGLMHLGAGQ AIMLLVSLLL LWLAIAKKFE PLLLLPIGFG GLLSNIPEAG 
MALTALESLL AHHDAGQLAV IAAKLNCTPD VHAIKEALAL ALPSVQSQME NLAVDMGYTP
GVLALFYKVA IGSGVAPLVI FMGVGAMTDF GPLLANPRTL LLGAAAQFGI FATVLGALTL
NYFGLIAFTL PQAAAIGIIG GADGPTAIYL SGKLAPELLG AIAVAAYSYM ALVPLIQPPI
MKALTTETER KIRMVQLRTV SKREKILFPV VLLLLVALLL PDAAPLLGMF CFGNLMRESG
VVERLSDTVQ NGLINSVTIF LGLSVGAKLV ADKFLQPQTL GILLLGVVAF GIGTAAGVLM
AKLLNLCSKN KINPLIGSAG VSAVPMAARV SNKVGLESDP QNFLLMHAMG PNVAGVIGSA
IAAGVMLKYV LAM