Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0832 |
Symbol | |
ID | 6483377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 836270 |
End bp | 837571 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642736244 |
Product | oxaloacetate decarboxylase beta chain |
Protein accession | YP_002040004 |
Protein GI | 194446069 |
COG category | [C] Energy production and conversion |
COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAGTC TGAACGCCCT GCTTCAGGGC ATGGGGCTGA TGCACCTTGG CGCAGGCCAG GCCATCATGC TGCTGGTGAG CCTGCTGCTG CTGTGGCTGG CGATAGCGAA GAAGTTCGAA CCGCTGCTGC TGCTGCCGAT TGGCTTCGGC GGCCTGCTCT CCAACATCCC GGAAGCGGGT ATGGCGCTGA CCGCGCTGGA AAGCCTGCTG GCGCATCACG ACGCCGGGCA GCTGGCGGTG ATTGCCGCGA AGCTCAACTG CACGCCGGAC GTGCACGCCA TCAAGGAAGC GCTGGCCCTT GCTCTGCCGT CGGTGCAGAG CCAGATGGAG AACCTGGCGG TGGACATGGG CTACACGCCG GGGGTGCTGG CGCTGTTCTA TAAAGTGGCG ATTGGCTCCG GCGTCGCGCC GCTGGTCATC TTTATGGGCG TCGGCGCGAT GACCGACTTC GGCCCGCTGC TGGCCAACCC GCGCACCCTG CTGCTCGGCG CGGCGGCGCA GTTCGGCATC TTCGCCACGG TGCTGGGGGC GCTGACGCTG AACTACTTCG GCCTGATTGC CTTCACCCTG CCGCAGGCGG CGGCCATCGG CATTATCGGC GGCGCGGACG GTCCGACGGC CATTTACCTG TCGGGCAAGC TGGCGCCGGA GCTGCTGGGG GCCATCGCGG TGGCGGCGTA CTCGTATATG GCGCTGGTGC CGTTAATCCA GCCGCCGATT ATGAAGGCGC TGACCACGGA GACGGAGCGG AAAATCCGCA TGGTGCAGCT GCGCACGGTG AGTAAGCGGG AAAAAATCCT CTTCCCGGTG GTGCTGTTAC TGCTGGTGGC GCTGCTGCTG CCGGACGCCG CGCCGCTGCT GGGGATGTTC TGCTTTGGCA ATCTGATGCG TGAAAGCGGC GTGGTGGAGC GTCTGAGCGA CACGGTGCAG AACGGGCTGA TTAATAGCGT GACCATTTTC CTCGGGCTGT CGGTGGGCGC CAAGCTGGTG GCGGACAAGT TCCTGCAACC GCAGACGCTG GGCATTCTGC TGCTGGGGGT GGTTGCGTTC GGTATCGGCA CCGCCGCCGG GGTGCTGATG GCGAAGCTGC TGAACCTGTG CAGTAAGAAC AAAATCAACC CGCTGATTGG CTCCGCCGGC GTGTCGGCAG TGCCGATGGC GGCCCGCGTA TCGAACAAGG TGGGGCTGGA GTCGGACCCG CAGAACTTCC TGCTGATGCA CGCGATGGGC CCGAACGTGG CGGGGGTGAT TGGTTCGGCC ATTGCGGCGG GCGTGATGCT GAAGTACGTG CTGGCGATGT AA
|
Protein sequence | MESLNALLQG MGLMHLGAGQ AIMLLVSLLL LWLAIAKKFE PLLLLPIGFG GLLSNIPEAG MALTALESLL AHHDAGQLAV IAAKLNCTPD VHAIKEALAL ALPSVQSQME NLAVDMGYTP GVLALFYKVA IGSGVAPLVI FMGVGAMTDF GPLLANPRTL LLGAAAQFGI FATVLGALTL NYFGLIAFTL PQAAAIGIIG GADGPTAIYL SGKLAPELLG AIAVAAYSYM ALVPLIQPPI MKALTTETER KIRMVQLRTV SKREKILFPV VLLLLVALLL PDAAPLLGMF CFGNLMRESG VVERLSDTVQ NGLINSVTIF LGLSVGAKLV ADKFLQPQTL GILLLGVVAF GIGTAAGVLM AKLLNLCSKN KINPLIGSAG VSAVPMAARV SNKVGLESDP QNFLLMHAMG PNVAGVIGSA IAAGVMLKYV LAM
|
| |