Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0831 |
Symbol | oadA |
ID | 6485099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 834482 |
End bp | 836257 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642736243 |
Product | oxaloacetate decarboxylase |
Protein accession | YP_002040003 |
Protein GI | 194443228 |
COG category | [C] Energy production and conversion |
COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.977578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTT CCATTACCGA CGTCGTCCTG CGTGACGCCC ACCAGTCCCT TTTCGCCACC CGTCTGCGCC TTGACGATAT GCTGCCGATT GCCGCCGCGC TCGACGACGT GGGCTACGGC TCCCTCGAAT GCTGGGGCGG CGCCACCTTT GACGCCTGCA TCCGCTTTCT CGGCGAGGAC CCGTGGCTGC GCCTGCGCGA GCTCAAAAAA GCCATGCCGA AGACTCCCCT GCAGATGCTG CTGCGCGGCC AGAACCTGCT CGGCTATCGC CATTACGCCG ATGACGTGGT GGAACGCTTC GTCGAACGCG CGGTGAAAAA CGGCATGGAC GTCTTCCGCG TCTTCGACGC CATGAACGAC CCGCGCAATA TGAAAGCCGC ATTACAGGCG GTACGCAGCC ACGGCGCGCA CGCCCAGGGC ACGCTGAGCT ATACCACCAG TCCGGCGCAC ACCCTGCAGA CCTGGCTGGA TTTAACGGAG CAACTGCTGG AAACCGGCGT TGACTCGATT GCCATCAAGG ATATGTCCGG CATTCTCACC CCGATGGCCG CTTTTGAGCT GGTGAGCGAA ATCAAAAAAC GTTTTGAGGT GCGCCTGCAC CTGCACTGTC ACGCCACCAC CGGGATGGCG GAGATGGCCC TGCTGAAGGC TATCGAGGCG GGCGTTGACG GCGTCGACAC GGCGATTTCC TCCATGAGCG CCACCTACGG CCACCCGGCC ACCGAAGCGC TGGTGGCGAC GTTGGCAGGT ACTGAGCACG ACACCGGGCT GGATATCCTG AAGCTGGAAA ATATCGCCGC GTACTTCCGC GAGGTGCGCA AAAAGTATCA CGCCTTTGAA GGCCAGCTGA AGGGCTACGA CAGCCGTATT CTGGTGGCCC AGGTGCCGGG CGGAATGCTC ACTAACCTCG AAAGCCAGCT GAAGCAGCAG AACGCGGCGG ACAAACTCGA CCAGGTGCTG GCGGAAATCC CCCGCGTGCG CGAGGACCTC GGCTTTATCC CGCTGGTGAC CCCGACCTCG CAGATTGTCG GCACTCAGGC GGTGCTCAAC GTCCTGACCG GAGAACGCTA CAAAACCATC GCCAAAGAAA CCGCCGGCAT TCTGAAAGGC GAATACGGCC ACACCCCGGT GCCGGTCAAC GCGGCGTTAC AGGCCCGCGT GCTGGAAGGG GGCGCTCCGG TGACCTGCCG TCCGGCGGAC CTGCTGAGAC CGGAGCTGGC TGAACTGGAA GCGGACGTCA GGCGCCAGGC GCAGGAGAAG GGCATCACTC TGGCGGGAAA CGCCATCGAC GACGTGCTCA CCGTGGCGCT GTTCCCGCAA ATCGGCCTCA AATTCCTTGA AAACCGCCAC AACCCGGCGG CGTTTGAGCC GGTACCGCAG GCGGAAGCCG CGCAGCCTGC CGCTGCCCCG GCAAAAGCTG CAGCTTCCGG TATCTACACC GTCGAAGTGG AAGGCAAGGC CTTTGTGGTG AAGGTCAGCG ACGGCGGCGA TATCAGCCAG CTTACTACGG CTGTTCCGGC GGCCTCTTCC GCACCGGTTC AGGCTGCCGC TCCGGCAGGC GCAGGCACCC CGGTCACCGC GCCGCTGGCG GGCAACATCT GGAAGGTGAT TGCCGCTGAA GGCCAGACGG TGGCCGAAGG CGATGTGCTG CTGATTCTGG AAGCCATGAA AATGGAAACC GAAATCCGCG CCGCGCAGGC CGGGACGGTA CGCGGTATCG CCGTGAAGTC CGGGGACGCC GTCTCCGTGG GCGATACCCT GATGACGCTG GCGTAA
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Protein sequence | MTISITDVVL RDAHQSLFAT RLRLDDMLPI AAALDDVGYG SLECWGGATF DACIRFLGED PWLRLRELKK AMPKTPLQML LRGQNLLGYR HYADDVVERF VERAVKNGMD VFRVFDAMND PRNMKAALQA VRSHGAHAQG TLSYTTSPAH TLQTWLDLTE QLLETGVDSI AIKDMSGILT PMAAFELVSE IKKRFEVRLH LHCHATTGMA EMALLKAIEA GVDGVDTAIS SMSATYGHPA TEALVATLAG TEHDTGLDIL KLENIAAYFR EVRKKYHAFE GQLKGYDSRI LVAQVPGGML TNLESQLKQQ NAADKLDQVL AEIPRVREDL GFIPLVTPTS QIVGTQAVLN VLTGERYKTI AKETAGILKG EYGHTPVPVN AALQARVLEG GAPVTCRPAD LLRPELAELE ADVRRQAQEK GITLAGNAID DVLTVALFPQ IGLKFLENRH NPAAFEPVPQ AEAAQPAAAP AKAAASGIYT VEVEGKAFVV KVSDGGDISQ LTTAVPAASS APVQAAAPAG AGTPVTAPLA GNIWKVIAAE GQTVAEGDVL LILEAMKMET EIRAAQAGTV RGIAVKSGDA VSVGDTLMTL A
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