Gene SNSL254_A0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0829 
Symbol 
ID6484125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp832903 
End bp834171 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content38% 
IMG OID642736241 
Productanion transporter 
Protein accessionYP_002040001 
Protein GI194442349 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCAG CGATTATTAC TTTGTTGGTT TTAGTGGTTG CAATAATTAT CTTTGTTAGC 
GATCGTCTTC CTATGGGATT AGTTGCATTT ATGGTCCCAA TGGCACTTTA TTTTACCGGT
GTTATCGATG CTAAGGATAT TTTTGCTTCA ATCGTAAATG CGAATGTTAT TCTTATCGTC
GCCATGTGTG TACTCGGTGC GGCATTTTTT AAAACAGGTT TGGCATGGCA ATCAAGTAAA
ATTTTACTAA AATATGCTAA AACAGAAAGA AGCCTTAGTG TATTGATTTT TCTTATTGGT
GGAGTTATGT CTGCCTTTGT TTCTAATAGC GGAACAGTTG CTGTGCTAAT TCCTATTGTT
TTAGGTATTG CCGCCAGTAG TCAGATTAAG CCTATTAAAC TTCTTATGCC TCTGGTTTTT
GGGGCAACAA TCGGTGCTGA TATTTCTATT ATCGGTTCGC CAGGAAATCT GATTGCTAAA
AATACTATTG AAACTTTTAG TAAAGGAAGT CTGTCGGTGC CATTTTTCGA ATACGCTAAA
ATTGGTATTC CTTTGCTGAT TGCATGCTCT ATATTTCTCT ATTTCTTCGG TTCAAAACTC
ATCGCAGATC GTGATGGAAA TACACAATCT GATTCTCAAA TGGATTATAG CCAAATTCCG
GCCTGGCATA GAAATTTAAC TTTAGCCGTT TTTATTCTGT CTATCGCTGG AATGGTGGCA
ACTGATTATA TTAAGCTTCT GCCTCCAATG CATATTATTG CATGTTGTGC GGCTATTGTT
CTTGTATTCG CTGGCGTTTT AACACAAAAG GAAACTTTTA ATTCTTTTGA AACGCTAACT
GTTTTCATGC TTGCGTTTAT GATGCCTTTA GGTGCCGCGC TTAATTCTAC TGGTGCTGGA
GAAATGATTG CCAATGCCGT TATTTCAGTA ACCGGAGATT CTGGCGTTAT GATTATTATG
GCGTCATTGT GGATACTTAC ATGGGCTTTG ACTCAAGTAA TGAGTAACAC TGCAGCATGT
ACGTTGTTAT GCCCGGTAGG ATGGACTATC GCACAGTCTA TTGGCGCAGA CCCTCGTGCA
GTTGTTATTG CTGTTTTTAT TGCGAGTAGT GTTGCTGTTT GTACCCCAAT GGCTATTCCA
GCAAACTCAA TGATTATTGG CCCGGGGAAT GTTAAATTTA AAGATTTCTT AAAACCCGGA
TTGGCGATTA GTTTGGTTTG TTTTATCGTT AGTATGATTT TACTACCGGT ATTTTATCCA
TTCTATTAA
 
Protein sequence
MSPAIITLLV LVVAIIIFVS DRLPMGLVAF MVPMALYFTG VIDAKDIFAS IVNANVILIV 
AMCVLGAAFF KTGLAWQSSK ILLKYAKTER SLSVLIFLIG GVMSAFVSNS GTVAVLIPIV
LGIAASSQIK PIKLLMPLVF GATIGADISI IGSPGNLIAK NTIETFSKGS LSVPFFEYAK
IGIPLLIACS IFLYFFGSKL IADRDGNTQS DSQMDYSQIP AWHRNLTLAV FILSIAGMVA
TDYIKLLPPM HIIACCAAIV LVFAGVLTQK ETFNSFETLT VFMLAFMMPL GAALNSTGAG
EMIANAVISV TGDSGVMIIM ASLWILTWAL TQVMSNTAAC TLLCPVGWTI AQSIGADPRA
VVIAVFIASS VAVCTPMAIP ANSMIIGPGN VKFKDFLKPG LAISLVCFIV SMILLPVFYP
FY