Gene SNSL254_A0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0828 
Symbol 
ID6483529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp831697 
End bp832623 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content40% 
IMG OID642736240 
Producttranscriptional regulator 
Protein accessionYP_002040000 
Protein GI194444122 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATC GGCATCACCT CGAACTAACA TGGCTCGAAG ACTGTCTGGC TCTAAAAGAA 
ACGTTAAATT TCTCAAAAGC GTCTGCCTCA AGATATGTGA CTCAACCCGC ATTTAGTCGT 
CGGATACAAT CTCTCGAAGA ATGGGTGGGT ACGCCCCTTT TTGAAAGAAG TAAACGGGGA 
GTCACCCTTA CCAAGGCCGG AGAAGTATTT ACAGACCAGC TTCCCGAACT GATCCACTCC 
TTGTACACAT TGAAAAGTGA TACCCTTGAG GCCGCAGGTA ATAAACAACC TAGTCTTGTT 
TTTTCAGCAA CGCATGCTTT GTCTTTCTCT TTTGTACCGC ATTTGTTAAA ACAGAGTGAT 
AAAATTGCAA AATTTGGTTC ATTTCGTCTT TTATCTGACT CATTGAATGC GTGCGAAAAA 
ATGATGCGGC AGGGAGATTC ACAATTTTTG CTGTGTCACC ATCACCCACA TATGCATCTA 
AATTTAAATA AAAATAACTT TATGAGCATT CGTCTTGGGT TTGATACATT AATTCCATTC 
AGTAAACCAG ACTCAGAAAC GTTAAAACCG TTGTGGAATA TAAATAATAA GATTCAATTC 
CCTTACCTTT CTTTTTCATC ACAATCAGGT CTGGGAAGAA TAATAGCAAA TACAGCGTCT 
ATTAACAGAA TTACCCATAA TATAAATGTT GCCTTTGTGG CCGATCTGGC AGCAACACTA 
TTGGCAATGG TCAGATCTGG CGATGGTGTT GCCTGGATAC CTCAAAGCCT TGCCAGGCAA 
GATATAGAGG CTAAAACTAT TGTTACTGCA GCGGAAAAAG AAAGCAATTT ATGGGTCCCC 
ATAGAAATAA GACTTTATAG ACCAGCCAAG AGAATGCCTC CAGATGCCGA AGAGCTATGG 
GAAATTTTTG TTGAAGAACA AATATAA
 
Protein sequence
MQYRHHLELT WLEDCLALKE TLNFSKASAS RYVTQPAFSR RIQSLEEWVG TPLFERSKRG 
VTLTKAGEVF TDQLPELIHS LYTLKSDTLE AAGNKQPSLV FSATHALSFS FVPHLLKQSD 
KIAKFGSFRL LSDSLNACEK MMRQGDSQFL LCHHHPHMHL NLNKNNFMSI RLGFDTLIPF 
SKPDSETLKP LWNINNKIQF PYLSFSSQSG LGRIIANTAS INRITHNINV AFVADLAATL 
LAMVRSGDGV AWIPQSLARQ DIEAKTIVTA AEKESNLWVP IEIRLYRPAK RMPPDAEELW 
EIFVEEQI