| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0809 |
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| Symbol | tolR |
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| ID | 6486739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 818610 |
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| End bp | 819038 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642736221 |
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| Product | colicin uptake protein TolR |
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| Protein accession | YP_002039987 |
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| Protein GI | 194444970 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.005244 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.553409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGAA CGCGTGGACG AGGTCGTCGC GAACTTAAGT CCGAAATCAA TATCGTACCG
CTACTCGACG TACTGTTGGT GCTGCTGCTG ATCTTTATGG CAACCGCGCC GATCATTACC
CAGAGCGTGG AAGTCGACTT ACCGGAGGCG AATCAGTCGC AGGCGGTCAG TAGTAACGAC
GATCCACCGG TCATTATTGA GGTTTCCGGA GTAGGGCAAT ACAGCGTAGT GGTTGATAAA
GATCGAATGG ATCAACTGCC GTCTGAACAG GTGATCGCAG AAGTAAAGCG TCATCTGCAG
GCTAATCCGA AAACAGTCTT TTTAATCGGC GGCGCGAAAG AGGTGCCGTA CGATGAAATA
ATTAAAGCGC TGAACTTGTT ACACAGCGCG GGCGTAAAAT CGGTTGGCTT AATGACGCAG
CCAATCTGA
|
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| Protein sequence | MARTRGRGRR ELKSEINIVP LLDVLLVLLL IFMATAPIIT QSVEVDLPEA NQSQAVSSND
DPPVIIEVSG VGQYSVVVDK DRMDQLPSEQ VIAEVKRHLQ ANPKTVFLIG GAKEVPYDEI
IKALNLLHSA GVKSVGLMTQ PI
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