Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0804 |
Symbol | cydB1 |
ID | 6484946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 815724 |
End bp | 816863 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642736216 |
Product | cytochrome d ubiquinol oxidase subunit II |
Protein accession | YP_002039982 |
Protein GI | 194443845 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0162307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.359047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATT ATGAAGTACT ACGTTTTATC TGGTGGCTGC TGGTTGGCAT TTTGCTAATT GGTTTCGCCG TCACCGATGG GTTCGACATG GGGGTGGGGA TGCTCACCCG TTTCCTCGGT CGTAACGACA CCGAACGTCG AATTATGATT AACTCTATCG CCCCGCACTG GGACGGTAAC CAGGTGTGGT TGATCACCGC GGGCGGTGCG TTGTTTGCTG CCTGGCCGAT GGTTTACGCC GCGGCGTTCT CCGGTTTCTA TGTAGCGATG ATCCTGGTGC TGGCGTCTTT GTTCTTCCGT CCGGTCGGTT TTGATTACCG TTCCAAGATT GAAGACCCGC GCTGGCGCAA CATGTGGGAC TGGGGCGTGT TCATCGGTAG CTTTGTGCCG CCGCTGGTGA TTGGCGTGGC CTTTGGCAAC CTGTTGCAGG GCGTGCCGTT CCACGTGGAT GAGTATCTGC GTCTGTACTA CACCGGTAAC TTCTTCCAGT TGCTGAACCC GTTTGGTCTG CTGGCGGGTA TCGTAAGCGT AGGGATGATC ATCACGCAGG GGGCGACTTA CCTGCAAATG CGTACCGTTG GCGAACTGCA CCTGCGCGCG CGCGCCACCT CGCAGATTGC GGCGCTGGTG ACATTAGTGT GCTTTGCGCT GGCGGGCGTT TGGGTAATGT ATGGTATTGA TGGTTATGTC GTGACATCCG CGATTGACCA TCATGCCGCC TCTAACCCGC TGACTAAAGA AGTGGCGCGT GAAGCTGGCG CCTGGCTGGT GAACTTTAAT AATGCTCCGA TCCTGTGGTT GGTTCCGGCT CTGGGCGTGG TTCTGCCGCT GCTGACTATC CTGACTTCCC GTATGGAGAA AGGCGCGTGG GCATTCCTGT TCTCTTCGCT GACCCTGGCC TGCATTATTC TGACGGCGGG TATCGCTATG TTCCCATTTG TGATGCCGTC CAGCACGATG ATGAATGCCA GCCTGACCAT GTGGGATGCG ACATCCAGCC AGATGACGCT GAACCTGATG ACCTGGGTTG CGGCGGTGTT CGTACCGATC ATTCTGATCT ACACCAGCTG GTGTTACTGG AAAATGTTCG GTCGTATCAC TAAAGAACAT ATTGAAAGCA ACACCCACTC TCTGTACTAA
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Protein sequence | MIDYEVLRFI WWLLVGILLI GFAVTDGFDM GVGMLTRFLG RNDTERRIMI NSIAPHWDGN QVWLITAGGA LFAAWPMVYA AAFSGFYVAM ILVLASLFFR PVGFDYRSKI EDPRWRNMWD WGVFIGSFVP PLVIGVAFGN LLQGVPFHVD EYLRLYYTGN FFQLLNPFGL LAGIVSVGMI ITQGATYLQM RTVGELHLRA RATSQIAALV TLVCFALAGV WVMYGIDGYV VTSAIDHHAA SNPLTKEVAR EAGAWLVNFN NAPILWLVPA LGVVLPLLTI LTSRMEKGAW AFLFSSLTLA CIILTAGIAM FPFVMPSSTM MNASLTMWDA TSSQMTLNLM TWVAAVFVPI ILIYTSWCYW KMFGRITKEH IESNTHSLY
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