| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0793 |
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| Symbol | sdhA |
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| ID | 6482151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 803333 |
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| End bp | 805099 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642736205 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002039971 |
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| Protein GI | 194443628 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.83395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.0589165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC CAGTCAGAGA ATTTGATGCT GTTGTGATTG GTGCCGGTGG CGCAGGTATG
CGCGCGGCGC TGCAAATTTC CCAGAGCGGC CAAACCTGTG CGCTGCTCTC GAAAGTCTTC
CCGACCCGTT CCCATACCGT TTCCGCGCAG GGCGGTATCA CCGTGGCGCT CGGCAATACC
CATGAAGATA ACTGGGAATG GCACATGTAC GACACCGTAA AAGGGTCGGA CTACATTGGT
GACCAGGATG CCATCGAATA TATGTGTAAG ACCGGACCGG AAGCGATTCT GGAACTGGAG
CACATGGGGC TACCGTTCTC CCGTCTTGAT GATGGACGTA TCTATCAGCG CCCGTTCGGC
GGCCAGTCGA AAAACTTTGG CGGCGAGCAG GCGGCACGTA CCGCGGCGGC GGCTGACCGT
ACCGGTCACG CCTTGCTACA CACGCTGTAT CAACAGAATT TGAAAAACCA CACCACGATT
TTCTCCGAAT GGTATGCGCT GGATCTGGTG AAAAACCAGG ATGGCGCGGT GGTGGGGTGT
ACCGCACTGT GCATCGAAAC CGGTGAAGTG GTGTACTTCA AAGCCCGCGC GACGGTGCTG
GCGACCGGCG GCGCAGGCCG TATCTACCAG TCCACCACCA ACGCTCACAT CAACACCGGT
GACGGTGTCG GTATGGCGCT GCGTGCCGGT GTCCCGGTGC AGGACATGGA AATGTGGCAG
TTCCACCCGA CCGGCATCGC CGGGGCGGGC GTGCTGGTGA CAGAAGGCTG CCGCGGCGAA
GGCGGTTACC TGCTGAACAA ACACGGCGAG CGCTTTATGG AGCGTTATGC GCCGAACGCC
AAAGACCTGG CGGGTCGTGA CGTGGTGGCG CGTTCCATCA TGATCGAAAT CCGTGAAGGC
CGCGGCTGTG ATGGTCCGTG GGGGCCGCAC GCTAAACTGA AACTGGATCA CCTGGGTAAA
GAGGTGCTGG AATCTCGCCT GCCGGGTATC CTGGAGCTGT CCCGTACTTT CGCCCACGTT
GACCCGGTGA AAGAGCCGAT TCCGGTTATC CCGACCTGCC ACTACATGAT GGGCGGTATT
CCGACTAAAG TGACCGGTCA GGCGCTGACC GTGAACGAGC AGGGCGAAGA CGTGGTCATT
CCGGGGCTGT TTGCGGTAGG CGAAATCGCC TGTGTATCGG TTCACGGCGC CAACCGTCTG
GGCGGTAACT CACTGCTGGA TCTGGTGGTC TTTGGCCGCG CGGCGGGGCT GCATTTACAG
GAATCCATCG CCGAGCAGGG CGTGCTGCGC GACGCCAGCG AGTCTGACGT TGAAGGTTCT
CTGGAGCGCC TGAATCGCTG GAACAATAAC CGCAATGGCG AAGATCCGGT GGCTATCCGC
AAAGCGTTGC AGGAGTGTAT GCAGCATAAC TTCTCCGTAT TCCGTGAAGG CGACGCGATG
GCGAAAGGGC TTGAGCAGTT GAAAGTGATC CGCGAGCGTC TGAAAAACGC CCGTCTGGAT
GACACGTCCA GCGAGTTTAA TACCCAGCGT GTTGAGTGTC TGGAGCTGGA TAACCTGATG
GAAACCGCCT ACGCCACTGC CGTATCAGCC AACTTCCGAA CGGAAAGCCG CGGCGCGCAT
AGCCGCTTCG ATTTCCCGGA GCGTGATGAT GCCAACTGGT TGTGTCATAC CCTGTATCAG
CCGCAAACGG AATCCATGAC GCGCCGAAGC GTCAATATGG AGCCGAAACT GCGTCCGGCG
TTCCCGCCGA AGATTCGTAC TTATTAA
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| Protein sequence | MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ GGITVALGNT
HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG
GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC
TALCIETGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMALRAG VPVQDMEMWQ
FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG
RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI
PTKVTGQALT VNEQGEDVVI PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGLHLQ
ESIAEQGVLR DASESDVEGS LERLNRWNNN RNGEDPVAIR KALQECMQHN FSVFREGDAM
AKGLEQLKVI RERLKNARLD DTSSEFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH
SRFDFPERDD ANWLCHTLYQ PQTESMTRRS VNMEPKLRPA FPPKIRTY
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