Gene SNSL254_A0791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0791 
SymbolsdhC 
ID6485703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp802588 
End bp802992 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content48% 
IMG OID642736203 
Productsuccinate dehydrogenase cytochrome b556 large membrane subunit 
Protein accessionYP_002039969 
Protein GI194444043 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.51944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.101074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCGT TATTCATGAT AAGAAATGTG AAAAAACAAA GACCTGTCAA TCTGGATCTA 
CAAACTATTC GGTTCCCCAT CACAGCGATA GCGTCCATTC TCCATCGCGT ATCCGGTGTG
ATTACTTTCA TCGCCGTCGG CATACTACTG TGGCTACTGG GCACCAGCCT CTCTTCTCCG
GAAGGATTCC AGCAGGCCGC CGATATCATG GACGGCTTCA TCGTTAAATT TATCATGTGG
GGCATCCTTA CCGCGCTGGC GTATCACGTC ATCGTGGGAA TTCGTCACAT GTTAATGGAT
TTTGGCTATC TGGAAGAAAC ATTCGAAGCG GGTCAACGCT CTGCCAAAAT CTCTTTTGTT
ATCACTGTCG TGCTTTCACT TCTCGCAGGA GTCCTCGTAT GGTAA
 
Protein sequence
MWALFMIRNV KKQRPVNLDL QTIRFPITAI ASILHRVSGV ITFIAVGILL WLLGTSLSSP 
EGFQQAADIM DGFIVKFIMW GILTALAYHV IVGIRHMLMD FGYLEETFEA GQRSAKISFV
ITVVLSLLAG VLVW