Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0776 |
Symbol | |
ID | 6486590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 786239 |
End bp | 786805 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642736188 |
Product | hypothetical protein |
Protein accession | YP_002039954 |
Protein GI | 194446017 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.371446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAGAA AATATCTTAC GCAAGAAGAG ATTGAAAAAC TGCTGTCAGC GACCGACAGA ATGCCCTTCC CGGAAAGAAA CCGCTGCTTA ATCCTGATGG CGTTTATTCA TGGCTTCCGG GCCAGTGAGC TGCTGGGGCT GCGCTTGTCG GATATTGATC TTGCAGGAAG ACAGCTTTAT ATCCGGCGCC TCAAAAATGG CTTTTCAACG TGTCACCCCC TCCTTCCCGA TGAGTATAAC GTACTGAAAA GCTGGCTCAG GGCCAGGAAG TATCTTGAGA AAGGGGCTGA CGGAGACTGG CTGTTCCTGT CGCTGCGACG GCATCCGCTC AGCAGACAAC AATTTTTTTA CATACTTCGT GAGGCAGGGC GGTTGGCCGA ATTAACGATA GCGCCACATC CTCATATGCT GCGACATGCC TGCGGCTACG CCCTTGCTGA CAAAGGGATT GATACACGAC TCATACAGGA CTATCTGGGG CACAGGAACA TCCAGCACAC CGTAAGATAC ACCGCAAGTA ACGCCGGGCG TTTTCATGGA ATATGGCGAA AAAAACGTCG AGTATAA
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Protein sequence | MKRKYLTQEE IEKLLSATDR MPFPERNRCL ILMAFIHGFR ASELLGLRLS DIDLAGRQLY IRRLKNGFST CHPLLPDEYN VLKSWLRARK YLEKGADGDW LFLSLRRHPL SRQQFFYILR EAGRLAELTI APHPHMLRHA CGYALADKGI DTRLIQDYLG HRNIQHTVRY TASNAGRFHG IWRKKRRV
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