Gene SNSL254_A0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0771 
Symbol 
ID6486757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp782660 
End bp783403 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content56% 
IMG OID642736183 
Productputative hydrolase-oxidase 
Protein accessionYP_002039949 
Protein GI194445149 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.751383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CCGAGCTGGA ACAACTGATT AACGACAAGC TGAACAGTGC GGCAATAAGC 
GATTATGCGC CGAATGGTTT ACAGGTCGAA GGAAAAGAGA CGGTACAGAA AATCGTTACC
GGCGTGACCG CAAGTCAGGC GCTGCTCGAT GAGGCGGTGC GTTTGCAGGC CGATGCGGTC
ATTGTTCATC ATGGTTACTT CTGGAAAGGC GAGTCTCCGG TTATTCGCGG GATGAGACGC
CGTCGCTTAA AAACGTTACT GGCAAATGAT ATTAACCTTT ACGGTTGGCA TCTGCCGCTG
GATGCGCATC CTGAGCTGGG CAACAATGCG CAGTTGGCGG CGCTATTGGG CATTACCGTG
AAAGGAGAAA TTGAGCCGCT GGTGCCGTGG GGAGAACTCT CAATGCCGGT GCCGGGGCTG
GAACTGGCCT CATGGATTGA AGCGCGTCTG GGGCGTAAAC CGCTATGGTG CGGCGATACC
GGGCCAGAGA ATGTGCAGCG TGTCGCCTGG TGTACCGGCG GCGGGCAAAG TTTTATTGAT
AGCGCCGCCC GCTTCGGCGT GGATGCTTTC ATTACCGGCG AGGTGTCTGA ACAGACCATT
CATTCCGCGC GCGAACAGGG GCTGCATTTT TATGCCGCCG GGCACCATGC CACTGAACGC
GGCGGTATTC GCGCCCTGAG CGAATGGTTG AACGAAAACA CGGCGTTGGA TGTGACGTTT
ATTGATATCC CTAACCCGGC ATAA
 
Protein sequence
MKNTELEQLI NDKLNSAAIS DYAPNGLQVE GKETVQKIVT GVTASQALLD EAVRLQADAV 
IVHHGYFWKG ESPVIRGMRR RRLKTLLAND INLYGWHLPL DAHPELGNNA QLAALLGITV
KGEIEPLVPW GELSMPVPGL ELASWIEARL GRKPLWCGDT GPENVQRVAW CTGGGQSFID
SAARFGVDAF ITGEVSEQTI HSAREQGLHF YAAGHHATER GGIRALSEWL NENTALDVTF
IDIPNPA