| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0758 |
|---|
| Symbol | pgm |
|---|
| ID | 6486015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 764370 |
|---|
| End bp | 766010 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642736170 |
|---|
| Product | phosphoglucomutase |
|---|
| Protein accession | YP_002039936 |
|---|
| Protein GI | 194445942 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0033] Phosphoglucomutase |
|---|
| TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0406624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 0.321306 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCC ACAACCGCGC AGGACAACCC GCGCAACAGA GTGATTTGAT TAACGTCGCC
CAACTGACGG CGCAGTATTA TGTACTGAAA CCGGAGGCAG GGAATGCAGA ACATGCCGTG
AAATTTGGCA CTTCCGGCCA TCGCGGCAGC GCAGGTCGTC ACAGTTTCAA CGAACCGCAT
ATTCTGGCGA TCGCCCAGGC GATTGCTGAA GAGCGGGCGA AAAACGGCAT TACCGGCCCC
TGCTATGTGG GGAAAGATAC CCATGCGCTC TCGGAACCGG CCTTCATTTC CGTGCTGGAA
GTGCTGGCGG CAAACGGCGT AGACGTTATC GTGCAGGAAA ATAATGGCTT TACGCCAACG
CCTGCCGTGT CAAATGCTAT CCTGGTCCAT AACAAAAAAG GCGGCCCGCT GGCTGATGGT
ATTGTCATTA CGCCGTCGCA CAACCCGCCG GAAGATGGCG GTATTAAATA TAATCCGCCC
AATGGCGGCC CGGCGGATAC CAACGTCACT AAAGTGGTAG AAGATCGTGC CAATGCGCTG
CTGGCGGGCG GCCTGCAAGG CGTTAAGCGC ATCTCTCTGG ATGCGGCAAT GGCCTCGGGC
CACGTTAAAG CGGTAGATCT GGTACAGCCG TTTGTCGAAG GGCTGGCGGA TATCGTTGAT
ATGGCGGCGA TTCAGAAAGC CGGTCTGACG CTGGGTGTCG ATCCGCTGGG CGGCTCCGGT
ATTGAATACT GGAAACGTAT CGCTGAGCAT TACAAACTTA ACCTGACGTT AGTTAACGAT
CAGGTTGATC AAACCTTCCG CTTTATGCAC CTTGATAAAG ATGGCGCGAT CCGTATGGAT
TGCTCCTCCG AATGTGCGAT GGCGGGTTTG CTGGCGCTGC GTGACAAGTT TGACCTGGCC
TTCGCCAACG ACCCGGACTA CGACCGTCAT GGCATCGTGA CGCCTGCAGG GCTGATGAAC
CCGAACCATT ATCTGGCGGT CGCCATTAAC TATCTGTTCC AGCATCGTCC GCTGTGGGGC
AAAGACGTGG CTGTCGGTAA AACGCTGGTC TCTTCCGCGA TGATTGACCG CGTGGTGAAT
GACTTGGGAC GCAAGCTGGT AGAAGTGCCG GTTGGCTTCA AATGGTTTGT TGACGGTTTG
TTCGACGGCA GCTTTGGTTT CGGCGGGGAA GAGAGCGCGG GCGCTTCGTT CCTGCGTTTC
GACGGTACGC CGTGGTCTAC CGATAAAGAC GGTATCATCA TGTGCCTGCT GGCGGCGGAA
ATCACCGCCG TTACCGGGAA AAACCCGCAA GAGCATTACA ATGAACTGGC AGCGCGTTTT
GGCGCGCCGA GCTATAACCG TCTGCAGGCG AGCGCGACCT CCGCGCAGAA AGCGGCATTG
TCTAAACTGT CTCCGGAAAT GGTGAGCGCC AGCACGCTGG CAGGCGACCC GATCACCGCG
CGTCTTACCG CAGCGCCGGG TAATGGCGCA TCGATTGGCG GCCTGAAGGT AATGACCGAT
AACGGCTGGT TCGCCGCGCG TCCATCCGGT ACGGAAGACG CTTACAAGAT CTATTGCGAA
AGCTTCCTGG GGGAAGAACA TCGCAAGCAG ATTGAGAAAG AAGCCGTTGA AATCGTTAGC
GAAGTATTGA AAAACGCCTG A
|
|---|
| Protein sequence | MAIHNRAGQP AQQSDLINVA QLTAQYYVLK PEAGNAEHAV KFGTSGHRGS AGRHSFNEPH
ILAIAQAIAE ERAKNGITGP CYVGKDTHAL SEPAFISVLE VLAANGVDVI VQENNGFTPT
PAVSNAILVH NKKGGPLADG IVITPSHNPP EDGGIKYNPP NGGPADTNVT KVVEDRANAL
LAGGLQGVKR ISLDAAMASG HVKAVDLVQP FVEGLADIVD MAAIQKAGLT LGVDPLGGSG
IEYWKRIAEH YKLNLTLVND QVDQTFRFMH LDKDGAIRMD CSSECAMAGL LALRDKFDLA
FANDPDYDRH GIVTPAGLMN PNHYLAVAIN YLFQHRPLWG KDVAVGKTLV SSAMIDRVVN
DLGRKLVEVP VGFKWFVDGL FDGSFGFGGE ESAGASFLRF DGTPWSTDKD GIIMCLLAAE
ITAVTGKNPQ EHYNELAARF GAPSYNRLQA SATSAQKAAL SKLSPEMVSA STLAGDPITA
RLTAAPGNGA SIGGLKVMTD NGWFAARPSG TEDAYKIYCE SFLGEEHRKQ IEKEAVEIVS
EVLKNA
|
|---|
| |